Lactuca sativa (garden lettuce): 111921056
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Entry
111921056 CDS
T05352
Symbol
RIBA3
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00740
Riboflavin metabolism
lsv00790
Folate biosynthesis
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
lsv01240
Biosynthesis of cofactors
Module
lsv_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
111921056 (RIBA3)
00790 Folate biosynthesis
111921056 (RIBA3)
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
111921056 (RIBA3)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
111921056 (RIBA3)
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Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
Motif
Other DBs
NCBI-GeneID:
111921056
NCBI-ProteinID:
XP_023772415
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Position
5:340379916..340382263
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AA seq
528 aa
AA seq
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MDSVIFYHPLFPPFTTTTRHTSTYAPPKPPPLSAHKTLTFTCWALGNDDGGSENGLGFGV
SASDAGELFPTPEISDAFMTVDAEITPDTVNFFVSDAEGDPDCPSDGFSSVEDALTTLRE
GKFVIVVDDENGDIEGNFVLAASFATPETIGFVIRHGSGIISVGMTTNDLERLNLPLMSP
ENEHKSSAPSFTITVDAIDTATGVSASDRAKTILALASRSSGPESFRRPGHVFPLKYRNG
GVLRRSGHTEASVDLVKLAGLDPVSVLSTIVNPEDGSIAQLNRLQKLALDHNIPLVLITD
LIRYRRKRERLVERVAISRLPTKWGLFEAYCYRSKLDGTEHIAIVKGDIGNGHDVLVRVH
SECLTGDIFGSGRCDCGKQLELAMQIIEESGRGALIYLRGHEGRGIGLGHKLKAYNLQDQ
GHDTVEANLELGFAPDAREYGIGAQMLRDIGVQTMQLMTNNPAKFTGLKGYGLAIVGRVP
VLTPITDENRRYFETKRTKMGHIYGSDIPLISPKTYKNDSSDVSDTKL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtcatcttctaccacccactattcccaccattcaccaccaccacaagacac
acatcaacctacgcacctcccaagccaccaccgctttccgcccacaagacactcactttc
acttgctgggcactcgggaacgacgacggcggcagtgagaacggtttgggtttcggtgtt
tcagcttcagacgccggagaactgttccctacgccggaaatttcagacgcttttatgaca
gtcgatgctgagataacccctgacaccgttaatttctttgttagcgatgccgagggtgat
cccgattgcccctccgacggcttctcctccgtcgaggacgctcttaccactctccgggaa
ggaaagtttgtgatcgttgtcgacgacgaaaatggcgatatcgaaggaaacttcgtcttg
gcagcatcatttgcaactccagaaaccatcggattcgtgatcagacacggctccgggatc
atctccgtcggcatgacaactaacgatctcgaaagattaaacctccctctaatgtcaccg
gaaaacgaacacaaatcttcagcaccatcattcacaatcacagtggacgcaatcgacaca
gcaaccggagtatctgcttccgatagagcaaaaacgattcttgctttagcatcccgttcc
tccggccctgaaagtttcagaagacccggccatgtgtttccattaaagtaccgaaacggc
ggtgttctccgacgatcagggcacacggaggcgtccgttgatcttgtcaaactcgctggt
ttggatccagtttctgttctttcaaccatcgtgaatccagaagatggttctatcgcccaa
ttgaatcgcttacaaaaactagcacttgatcacaacatccctcttgttctgatcaccgat
ttgatcaggtatagaaggaagagggaaagattagttgaaagagttgcgatttctaggcta
ccaacgaagtggggtttgtttgaagcttattgttatcgatcaaaactagatggaacagag
catatagccatagtcaagggcgacattggaaacgggcacgatgtgttagtacgggttcac
tcagaatgtttgaccggggacatatttgggtcgggtcggtgtgattgtgggaaacaattg
gaattggccatgcagataattgaggaatcgggtcgaggagccctaatttatcttcgggga
catgaaggaagaggtatcgggttgggacataagttaaaagcgtataatttgcaagatcaa
ggtcatgatactgtagaagcgaatctcgagctcggttttgctcccgatgcacgagaatat
ggaatcggcgctcagatgttaagagacattggagttcagacaatgcagctaatgactaat
aatccggccaagtttactggtctcaagggttacggtttggcaattgttggtcgagttcca
gtattgacaccgattacagatgaaaatagaaggtactttgaaacaaaaagaacaaagatg
ggtcatatatatggatctgatatccctttaattagtccgaaaacatataaaaatgactca
tcagatgtgtcagatacaaagttatga
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