Lactuca sativa (garden lettuce): 111921130
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Entry
111921130 CDS
T05352
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111921130
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111921130
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111921130
03036 Chromosome and associated proteins [BR:
lsv03036
]
111921130
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111921130
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111921130
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111921130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
111921130
NCBI-ProteinID:
XP_023772477
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All DBs
Position
9:194859004..194861403
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AA seq
514 aa
AA seq
DB search
MIKQILNKLPRKPSSKSSQSDGGKNESAFPSMNSSVSGANSNPKSNSSSGKGSNSSSSRS
MNGIHTPNMKSNQVKKPNQAAYESLPSFRDVPTSEKHNLFIKKLNMCCVVFDFTDPSKNL
KEKDIKRQTLLELVDYVSSVPSKFNEPTMQEITKMISTNLFRSLPTNHDSKLPDIYDPED
DEPNMEPSWPHLQIVYEFLLRFIASTETDAKIAKRYIDHSFVLKLLDLFDSEDQREREYL
KTILHRIYGKFMVHRPFIRKAINNIFFQFIFETEKHNGIAEMLEILGSIINGFALPLKEE
HKLFLMRALIPLHKPKCLSMYHQQLSYCVTQFVEKDFKLADIVIRGLVKYWPVTNSSKEV
MFLSELEEVLESTQAAEFQKCMVPLFRQIGRCLNSSHFQVAERALFLWNNDHIRNLITQN
RKVILPIIFPALEKNTRPRGHWNQAVQSLTLNVRKIFSDIDQTLFDECLNRYQEDEVKQK
ENNQKRESTWMRMETVAASNGNESRFASSVGVSS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaaatacttaacaagcttccgagaaaaccgtcttcaaaatcctctcaatcc
gatggggggaagaacgaatcggcttttccttcgatgaattcgagtgtttcaggggctaac
agtaatcctaagtccaattcatcatctggtaaaggttcgaattcaagttcttcaaggtct
atgaatggaattcatactccaaacatgaaatcaaaccaggtgaagaaacctaatcaagct
gcttacgaatcattaccaagttttcgcgacgtacccacttcagaaaaacacaatctgttc
ataaaaaagttgaacatgtgttgtgtagtgtttgatttcaccgacccatcaaagaatctg
aaagagaaggacatcaaacgacagactttactcgaacttgttgactacgtatcttcagtt
ccttcaaagttcaatgaacccacaatgcaagaaatcacaaaaatgatatccacaaatctc
ttccgctcactacccacaaatcacgattccaaactcccagatatatacgatccagaagac
gatgaaccaaacatggaaccttcatggcctcatctccaaatcgtatatgaattcctcctc
agattcatcgcttcaacagaaacagacgccaaaatcgccaaacgatacatcgatcattca
ttcgttttgaaactactcgatcttttcgattcagaagatcaaagagaaagagagtatttg
aagacaatcctacaccgaatctatggaaaattcatggtgcatcgcccgtttatcagaaaa
gcaataaacaatatcttttttcaatttatatttgaaaccgaaaagcataacggaatcgca
gaaatgctcgagatattggggagtataatcaacgggtttgctttacctttgaaagaagaa
cacaagctttttctaatgagggctttgatcccacttcataaacctaaatgtttatcgatg
tatcatcagcaattatcgtattgtgttacacaatttgtggaaaaagattttaaattggca
gatattgtgattagaggacttgtgaaatattggcctgtgactaatagctcaaaagaggtt
atgtttttaagtgaattggaggaagttttggagtctacacaagctgcagagtttcaaaaa
tgtatggtgcctttgtttaggcaaattgggaggtgtcttaatagttcacatttccaggtg
gctgaaagggcgttgtttttatggaacaatgatcacataagaaatctgataactcaaaac
cgaaaagtcatcttgccaataatcttccctgctttggagaaaaacacaaggccaaggggt
cactggaatcaagctgttcagagcttaactctgaatgtaaggaaaatcttttcagacatt
gatcaaacactgtttgatgaatgtctgaatagatatcaagaagatgaagtcaaacagaag
gaaaacaatcagaaacgtgagtcaacatggatgcgaatggaaactgttgcagcctcaaat
ggaaatgaatcgaggtttgcttcttctgttggagtcagtagctga
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