Lactuca sativa (garden lettuce): 111921257
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Entry
111921257 CDS
T05352
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111921257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111921257
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
SR proteins
111921257
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111921257
NCBI-ProteinID:
XP_023772599
LinkDB
All DBs
Position
9:complement(51040495..51044235)
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AA seq
270 aa
AA seq
DB search
MSHFGRAGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVDKLDGRVVDGREIMVQFAKYGPDAERIHKGRILEPAEKLKGRSRSR
SPRPSSRHRDDYKDRRRNRSRSRDRSEHERHRGRDRYRSRSRSRSRSRSPEYRKERSRRG
RYEDEKGRSRSRSPIRSRSPIRSTSPARSPARNSVSPRRSRSASPRRTPSRSRSPARRVE
KDRSPTPKSVSPRGKPDSRSPSPHRSDADE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaagagcaggtccgccggatatcagagatacctattcactcctcgtc
ctcaacatcacgtttcgtacaactgccgatgatttgttccctctttttgataagtatgga
aaggttgttgatgttttcatccctagagatcgcaggactggggattctcgaggctttgcc
tttgttcgatataagtatgcagatgaagcccagaaggcagtggacaagcttgatggaaga
gttgttgatggcagagagataatggttcaattcgccaagtatgggcctgatgctgaacga
attcataagggaagaatacttgaaccagctgagaagctgaagggaagatcaaggagccga
agtccaagaccaagttcaaggcatagagatgactataaggacagaagaagaaaccgaagc
agaagcagagacagatctgaacacgagaggcatcgaggaagggatcgatacagaagcaga
agtcgaagcagaagcagaagcagaagccctgaatatcgaaaagagcgcagcagaagagga
agatatgaagatgaaaagggtagaagcagaagtcgatctcctatcagaagcagatctcct
atcagaagcacttcccctgcccgatcgcctgcccgaaatagtgtgagccctcgaaggagt
aggagtgcatctccaagaagaacaccttcaaggagcagaagtccagcaaggcgtgttgag
aaagatcggtcgcctactccaaaaagtgtttcccctcgtgggaaacctgactctagaagc
ccatcaccacatcgttctgatgctgatgaatga
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