Lactuca sativa (garden lettuce): 111921558
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Entry
111921558 CDS
T05352
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111921558
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111921558
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111921558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
LPG_synthase_TM
Prok-RING_4
zf-RING_4
AF_0924
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
111921558
NCBI-ProteinID:
XP_023772906
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All DBs
Position
4:284168068..284171952
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AA seq
451 aa
AA seq
DB search
MLNHWVFGCFLCLLASWVTANVVLMGNNLTLAFDDIEANFAPPVKGSGECGTLFLAEPLD
ACEPLSNKTIEDSLNQPFLLIVRGGCSFEDKVRRAQSAGFKAAIVYNNDDTDLVAMAGNS
GGISIHAVFISKTSGLKLSMYAGITSLELWIIPSFENSAWSIMAISFISLLAMSAVLATC
FFVRRHRIRRDRPQASRVREFHGMSSRLVKAMPSLIFTAVLEDNCTSATCAICLEDYSVG
DKLRILPCRHKFHTICVDAWLTSWRTFCPVCKRDARTANGDPPASERTPLLSSNPASMAS
STILSSAWSSSYASSAAIHIGQSSRTHSISNSNSNLRSVSVASTPYNIHSSLQSNHQSPY
GLTPSRSSLDIRNLASSSHRSRASHLLSSNSLGYPSFSPLNSRHLSSYYPSPGNASSSYV
WSSSHQPHPLRHSDSAASFSPYASAHSLPED
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatcattgggtgttcggttgctttctatgtttattggcatcctgggtgactgct
aatgttgttttgatggggaataatcttactttagcttttgatgacatcgaagctaatttt
gctccacctgtgaaaggttctggggaatgtggaacattgtttcttgcagagccattggat
gcttgtgaacctttgagtaataaaacaattgaagacagcttaaaccagccctttttatta
atagttagaggaggatgtagctttgaggataaagttagaagagcacaatctgcagggttc
aaggcagccattgtctataataatgatgatactgatcttgttgcaatggcgggtaattcg
ggtggtatatcgatacacgcggtatttatttcaaaaacatcgggactaaagctgagcatg
tatgcgggtataacttcattggagctatggattatcccaagcttcgagaactctgcatgg
tcaatcatggccatatctttcatttcattgcttgccatgtcagcagtactcgctacatgt
ttctttgtgcgtaggcatcggataagacgagatcgccctcaggcttctcgtgttcgggaa
tttcatggaatgagtagtcggttagtgaaagctatgccgagtttaatatttacagctgtt
ttagaagataattgcacttctgccacatgtgctatatgtctcgaggattatagcgtcggg
gataagcttagaattttaccatgtcgccacaaatttcacacgatttgcgtggacgcgtgg
ctgacatcatggcgaacattctgccctgtttgcaagcgcgatgccaggaccgccaacggg
gacccaccagcctcggagcggaccccgctactctcctccaatccagcctccatggcatca
tccaccatcttatcttccgcgtggtcgtcttcatacgcatcctcagcagctattcacatt
ggtcaaagctcacgtacgcattctatttccaattccaattccaacctccgttccgtttcc
gttgccagtactccttacaatatccattcctcccttcaaagcaatcaccaatccccttac
ggccttactccctcacgaagctcattagacattaggaatctcgcatcttcttcgcataga
tcccgtgcctctcatttgctctcctcaaattccttgggttacccttccttctcacctcta
aattcgagacacctgtcctcatattatccgagcccggggaacgcttcatcgagttacgtt
tggtcttcgagtcaccaaccgcaccctttgcgacacagcgactctgctgccagcttttct
ccctatgcttcggctcactcgcttccagaagactaa
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