KEGG   Lactuca sativa (garden lettuce): 111921611
Entry
111921611         CDS       T05352                                 
Symbol
LOC111921611
Name
(RefSeq) transcription factor PRE6
  KO
K28364  atypical basic helix-loop-helix transcription factor protein
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lsv03000]
    111921611 (LOC111921611)
Transcription factors [BR:lsv03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    111921611 (LOC111921611)
SSDB
Motif
Pfam: bHLH_ILI HLH CENP-F_leu_zip BLOC1S4 Syntaxin_2 TorS_sensor_domain SYCE1 Rrn6_HB CHIP_TPR_N IFT57 MukF_M ZapB bHLH_IRO3 COG3_N DUF948 Cyanophycin_syn bZIP_1 F_actin_bind
Other DBs
NCBI-GeneID: 111921611
NCBI-ProteinID: XP_023772962
LinkDB
Position
2:183971901..183972746
AA seq 88 aa
MSSRRSAGTPRITDDQIIELISKLQQLLPELRNRRSNKASASKVLQETCNYVRSLHKEVD
DLSDRLSQLLSTIDDNSPQASIIRSLIN
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtcgagcagacgatccgcaggaactccaaggatcacagacgatcagatcatagaactc
atctccaaacttcagcaacttcttcctgagcttcgaaatcgtcgttccaacaaggcatcg
gcttcaaaggtgttacaagagacgtgcaactacgtgagaagcttgcataaggaggttgat
gaccttagtgatcgtctatcacagttattgtccaccattgatgacaatagccctcaagct
tccatcattagaagtttaattaactaa

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