Lactuca sativa (garden lettuce): 111921611
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Entry
111921611 CDS
T05352
Symbol
LOC111921611
Name
(RefSeq) transcription factor PRE6
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111921611 (LOC111921611)
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111921611 (LOC111921611)
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
CENP-F_leu_zip
BLOC1S4
Syntaxin_2
TorS_sensor_domain
SYCE1
Rrn6_HB
CHIP_TPR_N
IFT57
MukF_M
ZapB
bHLH_IRO3
COG3_N
DUF948
Cyanophycin_syn
bZIP_1
F_actin_bind
Motif
Other DBs
NCBI-GeneID:
111921611
NCBI-ProteinID:
XP_023772962
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All DBs
Position
2:183971901..183972746
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AA seq
88 aa
AA seq
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MSSRRSAGTPRITDDQIIELISKLQQLLPELRNRRSNKASASKVLQETCNYVRSLHKEVD
DLSDRLSQLLSTIDDNSPQASIIRSLIN
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagacgatccgcaggaactccaaggatcacagacgatcagatcatagaactc
atctccaaacttcagcaacttcttcctgagcttcgaaatcgtcgttccaacaaggcatcg
gcttcaaaggtgttacaagagacgtgcaactacgtgagaagcttgcataaggaggttgat
gaccttagtgatcgtctatcacagttattgtccaccattgatgacaatagccctcaagct
tccatcattagaagtttaattaactaa
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