Lactuca sativa (garden lettuce): 111921847
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Entry
111921847 CDS
T05352
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111921847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111921847
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111921847
Membrane trafficking [BR:
lsv04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
111921847
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111921847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
111921847
NCBI-ProteinID:
XP_023773190
LinkDB
All DBs
Position
3:94590659..94593685
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AA seq
326 aa
AA seq
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MQGGEKEAQRYVWDGAIPLQVHLHDSEVTTLPPPPPALILAPRIGYLPLLSSQLKPFFSG
ALPPGVDTIWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILIPCDGED
SVKWSYINSLKEAAYIIHGSSKNVMNMSQPDQVELWRSVMNGKLDTYNRISSKLKLGIIE
DDFSEKVNPSLKAPHTVNETEATTTLKTSRIPVRLYLCNTNQDFENLETVPPFETWDQIS
YINRPVEINKEGKYFTLYDAVKSILPEFFHPADEEEGKDGVIKLVRIQGIEPKMEIPFSW
VVNNLMNPDYFLHICVYINAGRPMGT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaggagaaaaagaagctcaacgatacgtctgggacggagctatcccgctgcaa
gttcatcttcacgactccgaagtcactactctaccgccgccgccgcctgctctgatccta
gctccacgaatagggtatctacctttgttatcttcacaactcaagccattcttcagtggt
gctcttcctcctggagtagacactatctggtttgagtacaaaggattaccccttaaatgg
tatataccaacaggggttctttttgatcttctttgtgctgaacctgaaagaccttggaat
ttgacagtacattttagaggatacccaggaaacatcttgatcccctgtgatggggaagat
agtgtaaaatggagctatatcaattcattaaaagaggctgcatatataattcatggaagc
agtaaaaatgtcatgaacatgtcacaacctgatcaggttgaattatggcgctctgtcatg
aatggtaaactggacacctacaatcgcatttcatctaaacttaaacttggaataattgaa
gatgatttttctgaaaaagtaaatccctctttgaaagctccacacactgttaatgaaaca
gaagcaactacaacactcaaaacaagtagaatccctgttcgtttgtatctctgtaataca
aatcaagattttgagaatttagaaacagttccaccttttgaaacatgggatcaaatctcc
tatataaatcgacctgttgagattaacaaagaaggaaagtatttcactttatatgatgca
gtaaaatcaattctaccagaattttttcaccctgctgatgaagaagaaggcaaagatggg
gtgataaaacttgttaggattcaagggattgagccaaaaatggaaataccgttttcttgg
gtggttaacaatttgatgaatcctgattactttcttcatatttgtgtttacattaatgct
ggtagaccaatgggtacgtga
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integrated database retrieval system
