Lactuca sativa (garden lettuce): 122194439
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Entry
122194439 CDS
T05352
Name
(RefSeq) heat shock cognate 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
lsv04141
Protein processing in endoplasmic reticulum
lsv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122194439
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122194439
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122194439
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
122194439
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
122194439
03009 Ribosome biogenesis [BR:
lsv03009
]
122194439
03110 Chaperones and folding catalysts [BR:
lsv03110
]
122194439
04131 Membrane trafficking [BR:
lsv04131
]
122194439
03051 Proteasome [BR:
lsv03051
]
122194439
03029 Mitochondrial biogenesis [BR:
lsv03029
]
122194439
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
122194439
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
122194439
Spliceosome [BR:
lsv03041
]
Complex B
Other components
Prp19 complex
122194439
Complex C
Prp19-CDC5 complex
122194439
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122194439
Chaperones and folding catalysts [BR:
lsv03110
]
Heat shock proteins
HSP70 / DNAK
122194439
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
122194439
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
122194439
Proteasome [BR:
lsv03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122194439
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
122194439
Exosome [BR:
lsv04147
]
Exosomal proteins
Proteins found in most exosomes
122194439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DUF1464
RNB
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
122194439
NCBI-ProteinID:
XP_042754152
LinkDB
All DBs
Position
9:complement(42514770..42517305)
Genome browser
AA seq
610 aa
AA seq
DB search
MDGRGKDAPAIGIDLGTTYSCVAVWKHDHIQIIPNDQGNRTTPSCVAFVDGERLIGDGAK
NQVAMNPANTIFDAKRLIGRRFSDFKVKDDMNLWPFKVIEGPADTPKIVVSYKGEEKEFC
AEEISSMILVKMKETAEAYLGKPVKDAVITVPAYFNDSQRQATKDAGAIAGLNVINMINE
PTAAAIAYGLDNKSDINGKINVLVFDLGGGTFDVSILTIAEGGTIEVKAVAGDTHLGGED
FDNRMVDYCVREFRRKWNKDLTGNQRALGRLRCACEKAKRILSSSNVTSTDLDCLYDGID
FSMKFSRAKFEELNMGFFDSCMDTVEECLRDAKMEKSCVDEVILVGGSTRIPKVQCMLQE
LFERKELCKSVNPEEAVAYGAAFMAAKLNGNSHKSCRDLLLLDVTPLSLGVGLIGEEFDV
VIPRNTPIPTKKSKIYCTTRDDQTCVDVKVYQGERTRSTDNHLLGTFTISGIPPAPKGVA
KLKRYFEIDSNGILSVTSEILSTGKTEKLTIINANGRLSKEEIERMIEDADKYRKEDQEF
KKKADALNELEDYLYNMKNKTKYIKNGAMMKKIELVIADTTKWLEQNQAVSVDELQCKKE
HLESLWMLMF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggacggaagaggaaaggacgcaccagcgatcggcattgacctcggaacaacgtactca
tgtgtcgccgtttggaagcatgatcacatccaaatcattcccaatgatcaaggcaaccga
accacaccgtcatgtgttgcttttgttgatggagaacgtctcattggcgatggcgccaag
aatcaagtggcgatgaaccctgctaacaccatatttgatgctaagaggctgattggaagg
agattcagtgatttcaaagttaaggatgacatgaacttgtggccttttaaggtcatagaa
gggcctgctgacacaccaaagattgttgtatcctacaaaggtgaagagaaggaattttgt
gctgaagaaatttcatcaatgattcttgtcaagatgaaagaaactgctgaagcatacctc
ggaaaacctgtgaaagatgctgtgataactgtcccagcttactttaatgattcacaacgt
caagcaacaaaagatgctggtgctattgctggactaaatgttatcaacatgatcaacgaa
cctactgcagctgcaattgcttatggtttagacaataagtctgacattaatggcaagatc
aatgtgttggtctttgatttgggtggtggcacatttgatgtctctattttgacaattgct
gaagggggtaccattgaggttaaagctgttgctggtgacactcatttaggaggtgaggat
tttgataatcgaatggtggattattgtgttcgcgaattcaggaggaaatggaacaaggac
ttgacagggaaccaaagagcattgggtaggttgagatgtgcttgtgagaaagcaaaaagg
attctttcttccagtaatgtcacttctactgatttagactgcttatatgatgggattgat
ttttctatgaaattcagtcgagctaaatttgaagagttgaacatgggtttcttcgattca
tgtatggatactgtggaggaatgtttaagggatgcaaagatggagaaatcgtgtgtcgat
gaggtgattcttgttggtgggtcaactagaataccaaaggtccagtgtatgttgcaggaa
ttatttgaaaggaaggagctatgcaagagtgtgaaccctgaagaagctgttgcatatggt
gcagcatttatggctgcaaagttaaatggtaacagtcataagagctgtcgagatttgttg
ttattggatgtcactcctttgtcccttggtgtgggattgataggagaggaatttgatgtt
gtgatccctcggaatactccaatacctacgaagaaatctaaaatatattgtacaactcga
gacgaccaaacttgtgtagatgttaaggtgtatcaaggtgaacggaccagatcaacagat
aaccatttgttggggactttcacaatttctggaataccacctgctccaaaaggagttgca
aaacttaagcgctactttgaaatagattccaatggcattctaagtgtaacgtcggagata
ttatcaactggtaaaacagaaaaactcacaattatcaatgcaaatggacgactctctaaa
gaagagattgagaggatgatagaagatgccgacaagtacagaaaggaggaccaagaattc
aaaaagaaggcagatgcccttaatgagttagaagactacttatataacatgaagaataag
accaaatatataaagaatggtgcgatgatgaagaaaatagagcttgtcattgctgacacg
accaagtggctcgagcagaaccaagcggtatctgttgatgagcttcagtgcaagaaggaa
catctcgagtctctatggatgctgatgttttag
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