Lactuca sativa (garden lettuce): 122194844
Help
Entry
122194844 CDS
T05352
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122194844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
122194844
03400 DNA repair and recombination proteins [BR:
lsv03400
]
122194844
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122194844
Transcription machinery [BR:
lsv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
122194844
DNA repair and recombination proteins [BR:
lsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
122194844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
DUF1642
Motif
Other DBs
NCBI-GeneID:
122194844
NCBI-ProteinID:
XP_042752051
LinkDB
All DBs
Position
6:complement(93190221..93190871)
Genome browser
AA seq
216 aa
AA seq
DB search
MVREKITVSTRTLQWKCVESAADSKHLLYGRFILSLLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKISHQYSTIMGIQESVHEILMNLKEIVLRSNLYGTCEASIYVTGPRYVTAQD
IILPPYVEILDNTHHIASLTEPIELVIGLQIEKNREYLIKAPNTFQDGSYPIDHVFMPVX
NANHSIHSYENGKKEIIFLEIWTNGSLTPKEALYEA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaaataacagtatctactcggacactacagtggaagtgtgttgaatca
gcagcagacagtaagcatcttctttatgggcgctttattctgtctttgcttatgaaaggt
caagcagacacaataggcattgctatgcgaagagctttgcttggagaaatcgaaggaaca
tgtatcacacgcgcaaaatctgagaaaatatcacaccaatattctaccataatgggtatt
caagaatcagtacatgaaattttaatgaatttaaaagaaatcgtattgagaagtaatctc
tatggaacttgtgaggcgtctatttatgtcacgggccccagatatgtaactgctcaagat
atcatcttaccgccttatgtagaaatcctcgataatacacatcatatagctagcttgacg
gaacccattgagttggttattggattacagatagagaagaatcgtgaatatcttataaaa
gcgccaaatacctttcaagatggaagttatcctatagatcatgtattcatgccggtttga
aatgcgaatcatagtattcattcttatgaaaatggtaagaaagagataatatttctcgaa
atatggacaaatggaagtttaactcctaaagaagcactttatgaagcctag
DBGET
integrated database retrieval system
