Lactuca sativa (garden lettuce): 122196676
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Entry
122196676 CDS
T05352
Symbol
LOC122196676
Name
(RefSeq) two-component response regulator EHD1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122196676 (LOC122196676)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
122196676 (LOC122196676)
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122196676 (LOC122196676)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Cwf_Cwc_15
D123
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
122196676
NCBI-ProteinID:
XP_042755763
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All DBs
Position
2:33214297..33237711
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AA seq
365 aa
AA seq
DB search
MTDVDVHTFLSLTKNMDVLPIVMSEQEDDAFLFEALKNGAFLVLKRPLTIDAVRHMRQDI
IRERIHKHEKCKKKNMVVKATTQATPIQENIRSGRKRKETCGPMKQVINKTNIDNNLLYQ
SSEEEEEDDDDDDDSTQKRVCLEWTPELHKKFLDAISELGEGRCFPKEILNLMDVPGLTR
MQVASHLQKCRKEKWKVNERGRTPTSSNSSTLSSNVSPLEVSGRKFGCMPLIQTDKNVKE
DHSSVIGINLSINGWQIDEKHKNEQTPRVLPIMNEFIQKNIVQPTPDILFPLGNGFDSNQ
DEGIGSKITKSTNNYFLQAISGSHDVGEGVSDPYNLSSIPRQTSDDFPDYLKDMDGNGPN
DDLIS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgttgacgtccatacatttcttagtttaacaaagaacatggacgtactaccc
attgtgatgtctgagcaagaggatgatgcattcctatttgaagctttaaagaacggtgct
tttcttgtcctcaagaggccacttactatcgatgcagttaggcatatgcgtcaagacatt
atcagagagagaattcataagcatgaaaaatgtaaaaaaaagaatatggttgttaaggcg
acaacacaagcaacaccgatacaggaaaatataagatctggtcgtaaaaggaaggaaaca
tgtggcccaatgaagcaagtgatcaacaaaactaatatcgacaataatctactctaccaa
tcatccgaagaagaagaagaagatgatgatgatgatgatgatagcacgcagaaaagggta
tgcttggagtggaccccagagcttcacaagaaattccttgatgctatcagtgagcttggt
gaaggaagatgttttccaaaggagatacttaatcttatggatgtccctggtcttacgaga
atgcaggttgctagtcatctccagaaatgtcgcaaggaaaaatggaaagttaatgaaaga
gggagaacgcccacttcatcaaatagttctacgttgtctagtaatgtttcaccactagag
gttagcggtagaaagtttggttgtatgcccttgatacaaaccgataaaaacgttaaagaa
gatcatagtagtgttattggcattaacttgtcaatcaatggatggcagatagatgagaaa
cacaagaatgaacaaacccccagagttttgccaataatgaacgaatttattcaaaaaaac
attgtccaacctacacctgatatcctatttccattaggaaatggctttgattcaaatcaa
gatgaaggcattggtagtaaaatcactaaatcaaccaataattattttctacaagcaata
tctggttcacatgatgttggtgaaggagtctcggatccatataacctttcatcaatccca
agacaaacatctgatgattttcctgattacctgaaagacatggatggtaacggtccgaat
gatgacttgatatcctaa
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