Lactuca sativa (garden lettuce): 3772845 Help Entry 3772845           CDS       T05352                                  Symbol rpoB Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism lsv  Lactuca sativa (garden lettuce) Pathway lsv03020   RNA polymerase Brite KEGG Orthology (KO) [BR:lsv00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     3772845 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lsv03021]     3772845 (rpoB)    03400 DNA repair and recombination proteins [BR:lsv03400]     3772845 (rpoB) Enzymes [BR:lsv01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      3772845 (rpoB) Transcription machinery [BR:lsv03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      3772845 (rpoB) DNA repair and recombination proteins [BR:lsv03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       3772845 (rpoB) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Motif Other DBs NCBI-GeneID:  3772845 NCBI-ProteinID:  YP_398316 UniProt:  Q56P13 LinkDB All DBs Position Pltd:13019..16201 Genome browser AA seq 1060 aa AA seqDB search MSTIPGFNQIQFEGFCRFIDQGLTEELSKFPKIEDTNQEIDFELFLERYQLVEPSIKERD AVYESLTYSSELYVSARLIWKNDRRRYIQEQTILIGKIPLMTSLGAFIVNGIYRIVINQI LQSPGIYYQSELNDNGISVYTGTIISDWGGRLELEIDRKTRIWVRVSRQQKLSILVLLSA MGLNIREILENVCYPELFLSFLNDKKQIGSKENAILEFYQQFACVEGDPVFSESLSKDLQ KKFFQQRCELGGIGRRNMNRRLNLDIPQNNTFLLPRDILAAADRLIRIKFGMGTLDDMNH LQNKRIRSVADLLQEQFGLALVRLENMARGNIYAALKHNWTPTPQNLVNSTPLTDTYKVF FRLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTARTATFPIRDIHPSHYGRICPIDTSE GINVGLIGSLAIHARIGRWGSLESPFYKISERSKGARMLYLSPGRDEYYMVAAGNSLALN QGIQEEQVVPARYRQEFLTIAWEQVHLRSIFSFQYFSIGASLIPFIEHNDANRALMSSNM QRQAVPLSQSEKCIVGTGLEGQAALDSGALAIAEHEGEIIYTDTDKILLSGNGDTLRIPL VMYQRSNKNTCMHQKPQVQRGKCIKKGQILAYGAATVGGELALGKNVLVAYMPWEGYNFE DAVLISERLVYEDIYTSFHIRKYEIQINQGSERVTNEIPHLEVHLLRNLDKNGIVMLGSW VETGDILVGKLTPQMVKESSYAPEDRLLRTILGMRVYTSKETCLKLPIGGRGRVIDVRWV QSSKTDETEKTESIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDM VFNPLGVPSRMNVGQIFESSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ TVNPWIFEPESPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGRYSRLT QQPLKGRAKKGGQRVGEMEVWALEGFGVAYILQEMLTYKSDHIRARQEVLGTIIFGGRIP TPEDAPESFRLFVRELRSLALELNHFLVSEKTFQLNRKEA NT seq 3183 nt NT seq  +upstreamnt  +downstreamnt atgtccacaatacctggatttaatcagatacaatttgaaggattttgtaggttcattgat cagggtttgacagaagaactttctaagtttccaaaaattgaagatacaaatcaagaaatt gactttgaattatttttggaaagatatcaattggtagaaccctcgataaaggaaagagat gctgtgtatgaatcactcacatattcttctgaattatatgtatctgcgagactaatttgg aaaaacgataggcgtaggtatatccaagaacaaacaattttgataggaaagatccctcta atgacttctctgggagcttttatagtaaatggaatatatagaattgtgatcaatcaaata ttgcaaagtcccggtatttattaccagtcagaattgaacgataatggaatttccgtctat accggcaccataatatcagattggggaggaagattagaattagagattgatagaaaaaca aggatatgggttcgcgtgagtaggcaacaaaaactatctattctagttctattatcagct atggggttgaatataagagaaattctagagaatgtttgctatcctgaactatttttgtct tttctgaatgataaaaaacaaatagggtcaaaagaaaatgctattttggagttttatcaa caatttgcttgtgtagagggagatccggtattttctgaatccttatctaaggatttacaa aaaaaattctttcaacaaagatgtgaattgggagggattggtcgacgaaatatgaatcgg agactgaaccttgatataccccagaacaatacatttttgttaccgcgagatatattggca gccgcggatcgtttgattcgaatcaaatttggaatgggtacacttgacgatatgaatcat ttgcaaaataaacgtattcgttctgtagcagatcttttacaagagcaatttggattggcc ttggttcgtttagaaaatatggctcgaggaaacatatatgcagcacttaagcataactgg acaccaactcctcagaacttggtaaattcaaccccattaacagatacttataaagttttt ttccgtttacacccattatctcaagttttggatcgaactaatccattgacacaaatagtt catgggagaaaattgagttatttgggcccggggggattgactgcgcgaactgctactttt ccaatacgagatattcatcctagtcactatgggcgtatttgcccaattgacacatctgaa ggaataaatgttggacttattggatccttagcaattcatgccaggattggtcgttggggg tctctagaaagtccgttttataaaatttctgagagatcaaaaggggcgcggatgctttat ttatcaccgggcagagatgaatactatatggtagcggcaggaaattctttggccttgaat cagggtattcaggaagaacaggttgttccagctcgatatcgtcaagaattcctgactatt gcatgggaacaggttcatcttcgaagtattttttccttccaatatttttctattggagct tccctcattccttttatcgagcataatgatgcgaatcgggctttaatgagttctaacatg caacgccaagcagtccctctttctcagtccgagaagtgcattgttggaactggattggaa ggccaagcggctctagattcaggggctcttgctatagccgaacacgagggagagattatt tataccgatactgacaagatccttttatcaggtaatggggatactctaaggattccatta gttatgtatcaacgttccaacaaaaatacttgtatgcatcaaaaaccccaggttcagcgg ggtaaatgcattaaaaagggacaaattttagcgtatggtgctgctacagttggtggcgaa ctcgctttggggaaaaacgtattagtagcttatatgccatgggaaggttacaattttgaa gatgcagtactcattagtgagcgcttagtatatgaagatatttatacttcttttcacata cgtaaatatgaaattcagattaaccaaggctccgaaagggtcactaatgaaataccacat ttagaagtccatttactccgaaatttagacaaaaatggaattgtaatgctgggatcttgg gtggaaacaggtgatattttagtaggtaaattaacgccccaaatggtgaaagaatcatcg tatgcccccgaagatagattgttacgaaccatacttggcatgcgggtatatacttcaaaa gaaacttgtctaaaattacctataggaggtaggggtcgggtgattgatgtgagatgggtc cagagttctaagacagatgagacagagaaaacagaaagtattcgtgtatatattttacag aaacgtgaaataaaagtaggcgataaagtagctggaagacatggaaataagggtatcatt tcaaaaattttgcctagacaagatatgccttatttgcaagatggaagacctgttgatatg gtcttcaacccattaggagtaccttcccgaatgaatgtaggacaaatatttgaatcttca ctcgggttagctgggggtttgctagacagacattatcgaatagcgccttttgatgagaga tatgaacaagaagcttcgagaaaactggtgttttctgaattatatgaagccagtaagcaa acagtgaatccatggatatttgaacccgagtctccaggaaaaagcagaatatttgatgga agaacaggggatccttttgaacaacctgttataataggaaagccttatatcttgaaatta attcatcaagttgatgataaaatccatgggcgttccagtgggcgttattcacgtcttaca caacaaccccttaaaggaagggccaagaaagggggacaacgggtaggagaaatggaggtt tgggctttagaggggtttggcgttgcttatattttacaagagatgcttacttataaatct gatcatattagagcgcgccaggaagtacttggtactataatctttggaggaagaataccg actcctgaagatgctccagaatcttttcggttgttcgttcgagaactacgatctttagct ctggaactgaatcattttcttgtatctgagaagactttccagcttaataggaaggaagct taa

DBGET integrated database retrieval system