KEGG   Lactuca sativa (garden lettuce): 40498763
Entry
40498763          CDS       T05352                                 
Symbol
RNAP, FKU89_mgp12
Name
(RefSeq) RNA polymerase
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    40498763 (RNAP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    40498763 (RNAP)
   03400 DNA repair and recombination proteins [BR:lsv03400]
    40498763 (RNAP)
Enzymes [BR:lsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     40498763 (RNAP)
Transcription machinery [BR:lsv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     40498763 (RNAP)
DNA repair and recombination proteins [BR:lsv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      40498763 (RNAP)
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 40498763
NCBI-ProteinID: YP_009652433
UniProt: A0A4D6PUF4
LinkDB
Position
MT:complement(257535..>258773)
AA seq 412 aa
TLFLFLVYLLEPDERKLSRPILRGGRSYPNFYFARPIDKKPTFLRLRGLLEYEIQPWKYR
IPIFFTTRSFDTFRNREMSTGGGSIRQQLANLDLRIIIDYSLVEWKELEEEEPTGNEWED
RKVGRRKDFLLRRMELAKHFIRTNIEPKWMVLRLLPVLPPELRPIYHIDEDKLVTSDINE
IYRRIIYRNNTLTDLLTTSIATPEELIISQEKLLQEAVDALLDNGICGQPMRDDHNRVYK
SLSDVIEGKEGRVRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQAFVIRDL
IRKHLASNIGVAKSQIRKKKPIVWEILQEILDDHPVLLNRAPTLHRLGIQAFLPVLVEGR
AICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSLLLPR
NT seq 1239 nt   +upstreamnt  +downstreamnt
acgctttttctttttttggtatacctacttgagccggatgaaaggaaactttcacgtccg
attttgcggggggggagatcctatcccaatttttattttgctaggcccatagataaaaaa
cctacttttttacgattacggggtttattagaatatgaaattcaaccctggaaatacagg
atccccattttttttactacccggagcttcgatacatttcgaaatcgagagatgtctacc
gggggaggttctatcagacaacaattagccaatctagatttacgaattattatagactat
tcattggtagaatggaaagaattggaggaagaggaacccacagggaacgaatgggaagat
cgaaaagttggaagaagaaaagattttttgcttagacgcatggaattggctaagcatttt
attcgaacaaatatagaaccaaaatggatggttttgcgtctattaccagttcttcctcct
gagttgagaccaatctatcatatagatgaggataaactagtgacctcggatattaatgaa
atctatagaagaattatctatcggaataatactcttacagatctattaacaacaagtata
gctacgccagaagaattaataatatctcaggaaaaattgctacaagaagccgtggatgca
cttcttgataatggaatctgcggacaaccaatgagggatgatcataatagagtttacaag
tcgctttcagatgtaattgaaggcaaagaaggaagagttcgcgagactctgcttggtaaa
cgggtcgattattcagggcggtccgtgattgtcgtgggcccttcactttcattacatcga
tgtggattgcctcgcgaaatagcaatagaacttttccaggcatttgtaattcgtgaccta
attagaaaacatcttgcttcgaacataggagttgctaagagtcaaattcggaaaaaaaaa
ccgattgtatgggaaatacttcaggaaattctggatgaccatcctgtattgctgaataga
gcgcctactctgcatagattaggcatacaggcattcctccccgttttagtggaagggcgc
gctatttgtttacatccattagtttgtaagggcttcaatgcagactttgacggggatcaa
atggctgttcatgtgcctttatctttggaggctcaagcagaggcgcgtttacttatgttt
tctcatatgaatcttttgtctcttctcctcccgcgataa

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