Ligilactobacillus saerimneri: GTO87_00090
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Entry
GTO87_00090 CDS
T08336
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lsw
Ligilactobacillus saerimneri
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsw03032
]
GTO87_00090 (gyrB)
03400 DNA repair and recombination proteins [BR:
lsw03400
]
GTO87_00090 (gyrB)
Enzymes [BR:
lsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GTO87_00090 (gyrB)
DNA replication proteins [BR:
lsw03032
]
Prokaryotic type
DNA Topoisomerases
GTO87_00090 (gyrB)
DNA repair and recombination proteins [BR:
lsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GTO87_00090 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QLL77174
UniProt:
A0A7H9EHS9
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All DBs
Position
12451..14415
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AA seq
654 aa
AA seq
DB search
MTEEEKKEALIQKEKAAEAYDASQIQVLKGLEAVRKRPGMYIGSTSSQGLHHLVWEIIDN
GIDEALAGFATEINVTVEKDNSITVIDDGRGIPVDIQKTTGKPAVETVFTVLHAGGKFGG
GGYKVSGGLHGVGASVVNALSTELDVEVKREGDTNIYAMSFDLGKVKEPMHVIGQCGVHE
HGTRVHFKPDPDVFKETTTYDIKILTTRIRELAFLNKGLRLTIDDQRLAEPTHEEFHYAG
GIKHYVEYLNEGKEALFAEPIYVEGEQDGITVEVALQYTDDYHSQLLSFTNNIHTYEGGT
HEAGFKTALTRVINDYARKAKLLKENEDNLSGEDVREGLTAVVSIKHPDPQFEGQTKTKL
GNSDARKVTDHMFAETFSKFLLENPDVAKRIVEKGTIAAKARVAAKRAREVTRKKNGLEI
SNLPGKLADNTSKDPEISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDR
ILANEEIRSLFTALGTGFGKDFDVEKANYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPM
IEKGYVYIAQPPLYQVRQGKMIQYIDSDEELEDVLGQLPPSPKPVIQRYKGLGEMDAEQL
WETTMDPDNRRLLRVDLSNAEEANSVFEMLMGDDVRPRRQFIEDNATFVENLDI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaagaggagaaaaaagaagcccttattcaaaaagaaaaagcggctgaagcatat
gatgcgagtcaaattcaagtcctcaaagggttagaggcggttagaaaacggccggggatg
tatattggttctaccagctcgcaggggttgcaccacctcgtttgggaaattattgataac
gggatcgatgaagccttagcggggtttgcaacggaaatcaatgtaactgttgaaaaagat
aacagtattaccgtaatcgatgacgggcggggaattccagtcgatatccaaaaaactacg
ggcaagccagccgttgaaacagtcttcactgttctccatgccggcgggaaattcggcggt
ggcggttataaagtttccggaggactccacggggtgggggcttcggtagttaatgcctta
tcaactgaactggatgttgaagttaaacgagaaggcgatactaatatttatgcgatgtcc
tttgacctaggaaaggttaaggagccaatgcatgttattggtcagtgcggtgttcatgag
catgggactcgggttcacttcaagccagatccggatgtattcaaggaaactactacgtat
gatatcaagattttaacgacacggattcgagaattagccttcttgaataaggggttacgc
ttgacaattgacgatcaacgtttagcagaaccgacgcatgaagaattccactatgctggt
gggattaagcattatgtagagtacctcaacgaaggaaaagaagcattatttgctgaaccg
atttatgttgaaggggaacaagacggaatcacggttgaagtcgccctccaatacactgat
gactatcattctcaacttttgtcctttactaataacattcatacgtatgaaggtgggaca
catgaagcgggcttcaagacggcattaacccgggtaattaacgactatgctcgtaaagct
aaattgctcaaagaaaacgaagacaacctttccggtgaagatgttcgtgaagggttgaca
gctgttgtatcgatcaaacaccctgatccgcagtttgaagggcagacaaagactaagttg
gggaattcagatgcgcgtaaagtgactgatcacatgtttgctgaaacattctctaaattc
ttgctggaaaaccctgatgttgctaagcgaatcgtcgaaaaggggactattgcagccaag
gcgcgtgtagctgctaagcgggcacgcgaagtgacgcggaagaagaatgggttagagatc
tcaaacttaccaggaaagttggctgacaataccagcaaagatccggaaatctcagaattg
tttatcgtcgaaggggattcagccgggggttccgctaagcaagggcggtcgcggttgaca
caagcaatcttgccaattagagggaagattttgaacgtcgaaaaagctagtatggaccgt
attttagctaacgaagaaattcgttccctctttactgccttagggacaggctttgggaaa
gactttgacgttgaaaaagctaattatcacaagttgattatcatgacggatgccgatgtt
gacggggcccacattcggaccttgctgttgacattattctatcggtacatgcggccaatg
attgaaaaaggttacgtatatattgcccaaccaccactgtatcaagtgcggcagggaaag
atgatccaatatatcgattcagatgaagaattggaagacgtacttggacaactaccacct
agtccgaagccagttatccagcggtacaaaggtttaggggaaatggatgcggaacagtta
tgggaaacaactatggatcctgacaaccgccggttactgcgggttgatctctctaatgcg
gaagaggctaatagcgtctttgagatgttaatgggggacgatgttcgaccacggcggcaa
tttattgaagacaacgcaacctttgttgaaaacctggatatttaa
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