Ligilactobacillus saerimneri: GTO87_01185
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Entry
GTO87_01185 CDS
T08336
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
lsw
Ligilactobacillus saerimneri
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GTO87_01185 (rnmV)
Enzymes [BR:
lsw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
GTO87_01185 (rnmV)
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Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
TauD
Motif
Other DBs
NCBI-ProteinID:
QLL77358
UniProt:
A0A7H9EI28
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All DBs
Position
254614..255198
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AA seq
194 aa
AA seq
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MNEKTKIREVIVVEGKSDTEQIKKAVNADTIETRGSAISDEVLAQIDELQQKRGVIVFTD
PDFNGEKIRKVITREVPGVKHAFLNRQDAAPHAKGSLGVEHASAEAIRDALAHLYTEEPD
TPALISLEDLQTAGLTAGPGAKRKRELLGEILRIGYTNGKQLYKRLQLFQIQPAEFAQAL
AQVNEMMGEQADGE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagacaaaaattagagaagtaatcgttgttgaaggcaaaagtgataccgaa
cagatcaaaaaggcggtcaatgcggacacaattgaaacgcgggggtctgcgatcagtgat
gaagtgctggctcagattgatgaactccagcaaaagcggggggtaattgtttttaccgac
ccagatttcaatggggaaaaaatccgcaaggttattacccgtgaagttcctggcgttaaa
cacgcttttctcaaccgccaggatgcagcgccccacgctaagggtagtttaggggtggag
catgctagtgcggaagccattcgggatgctttagcccacctgtataccgaagaacctgat
accccagctttgataagcctagaagacttacaaacggctggtttgactgctggtcccgga
gccaaacgcaaacgggaattgctcggtgagatcttacggatcggttatactaatggtaaa
caactgtacaaacgtctgcagctttttcagattcaaccagcggaatttgcccaggcgttg
gcacaggtcaatgagatgatgggagaacaagcagatggcgaataa
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