Ligilactobacillus saerimneri: GTO87_01605
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Entry
GTO87_01605 CDS
T08336
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lsw
Ligilactobacillus saerimneri
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsw03400
]
GTO87_01605 (radA)
DNA repair and recombination proteins [BR:
lsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GTO87_01605 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
DUF7125
ChlI
Lon_C
Rad51
nSTAND_NTPase5
AAA_24
AAA_22
RecA_N
ABC_tran
SLFN-g3_helicase
AAA_14
AAA_16
PAXNEB
NTPase_1
nSTAND3
AAA_19
AAA_5
ATPase_2
AAA_30
DUF7129
NPHP3_N
NACHT
MCM
Motif
Other DBs
NCBI-ProteinID:
QLL77427
UniProt:
A0A7H9EJB3
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Position
342050..343429
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AA seq
459 aa
AA seq
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MAKVKTNYLCQECGYISPRYLGRCPNCNSWNTFVEQVEKPDTTSNSTASPRVNLRGTQVQ
PQLLDTVTTQKVPRVTTGMQELDRVLGGGIVPGSLILIGGDPGIGKSTLLLQVSGQLAYS
QKKVLYVTGEESASQVKMRADRLGVGGNSFYIYPETDMASVKESIATTQPDFVVIDSVQT
MQEPGMNSAVGSVAQIREVTGDLMQIAKTNGITVFVVGHVTKGGAIAGPKILEHMVDTVL
YFEGDQHRVFRMIRAVKNRFGSTNEVGVFEMREQGLAEVTNPSEVFLQERLADATGSAVV
VSLEGTRPLLAEIQALVTPTAFGNAQRTTTGLNRNRVALIMAVLEKRAGLLLQNQDAYLK
TAGGLKLDEPAIDLALAISIASSYRDIATLPTDCFIGEIGLTGEVRRVSQIEQRVNEAVK
LGFRRVFVPQNNLDGWQFPDGIQVIGVKTVEQALKLAFK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagttaagaccaattatttgtgtcaggaatgtggatatatttcaccgcggtat
ctggggcggtgtcctaattgcaattcctggaatacctttgttgaacaggtggaaaagcct
gacactacttccaacagcactgctagtccgcgggtgaatttgcggggaacccaagttcaa
ccacaacttcttgatacagttactactcagaaggttccgcgcgtgacaactgggatgcaa
gagttagaccgggtattaggaggcgggatcgttcctgggtcactgattttaattggtggg
gatcccgggatcgggaaatcgacattactattacaagtatcaggccagttggcttactcc
caaaaaaaggtactttatgttactggggaagaaagtgccagccaagttaaaatgcgggct
gaccggttaggtgtcggtggaaattccttctatatttatccagaaactgatatggcaagt
gttaaagaaagtattgctacaacacagccggactttgtagtgatcgactcggtacaaacc
atgcaagaaccagggatgaattctgctgtgggcagtgtagcccagattcgcgaggtaact
ggtgatttaatgcagattgctaaaaccaacgggatcactgttttcgtagtgggacatgtt
actaaaggcggggcaattgctggtcctaaaattttagaacatatggttgatacagttttg
tattttgaaggcgatcagcaccgagttttccggatgatacgggctgttaagaatcgtttc
ggttcaactaatgaagttggggtctttgaaatgcgggaacaggggttagcagaagttact
aacccgtcagaggtctttttacaagaacgtttggccgatgcaactggttcagcagtggtg
gtttctttagaagggacacggccacttttggctgaaattcaggctttagtaacgccgact
gcttttggtaatgctcaacgtacaactactggtctcaatcgtaatcgggtagcgttgatt
atggcagtgcttgaaaaaagagctggtttattgttgcaaaatcaagatgcttatttgaag
actgccgggggattaaaattagacgaaccagcgattgatctagcattagcaattagtatt
gcttcaagttatcgagatatcgcaacactaccaacggattgtttcattggtgaaattgga
ttaactggtgaagtccgtcgggttagtcagattgagcaacgggttaacgaggcagtcaag
ctaggatttcggcgggtatttgttccacaaaacaatcttgatggatggcagtttcctgat
ggaatccaagttataggagttaagacggttgagcaggccctgaagttagcctttaaatag
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