Ligilactobacillus saerimneri: GTO87_02045
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Entry
GTO87_02045 CDS
T08336
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
lsw
Ligilactobacillus saerimneri
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsw03019
]
GTO87_02045 (rapZ)
Messenger RNA biogenesis [BR:
lsw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GTO87_02045 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
CoaE
AAA_18
AAA_16
AAA_28
Myosin_head
DUF5447
Motif
Other DBs
NCBI-ProteinID:
QLL78775
UniProt:
A0A7H9ENQ9
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All DBs
Position
432368..433264
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AA seq
298 aa
AA seq
DB search
MGEQIQLVIITGMSGAGKTVAMQSFEDLGYFCVDNMPPALLPKFWELVQESGKITKIALV
IDLRSRAFYDEIIEMLRNISDDGQIEPRILFLDSSDAELVSRYKETRRAHPLAMEGRILD
GVHLERKLLADIRGQAQIIIDTSDLSPRQLREEIFHNFETQNSSPFHVVVMSFGFKYGIP
IDSDIVMDVRFLPNPFYIPELRPKTGLDQDVYDYVMASERTEEFYQRFIGLLQYVLPGYV
AEGKSSVTIAIGCTGGQHRSVALTERVGHALADDYQVRIAHRDVEKHKQEKAGKTNEK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggggaacaaattcaattagttattattacaggaatgagcggtgctggtaagaccgtt
gcaatgcaaagcttcgaagatttaggctatttttgcgttgataatatgccaccagcactg
ttacctaagttttgggaattggtacaagaatcaggtaagatcactaagattgccctggtg
attgatttacggtcccgggctttttatgatgaaataattgaaatgttacgcaatatcagt
gatgatggacagattgaaccgcggatccttttcttagactcatccgatgcggaattggta
tcccggtataaggaaacacgtcgtgctcacccgttagcaatggaggggcggatcctagat
ggggttcatttggaacggaagttattggctgatataagaggacaagcgcagatcatcatt
gatacaagcgacctatcgccgcgtcagctacgggaagaaattttccataactttgaaacg
cagaatagttcacctttccatgtagtggtgatgtcatttggatttaagtatgggattcca
attgattctgatattgtgatggatgtccgcttcctccctaatccattttacattcctgag
cttcgtcctaagacagggttagaccaggatgtgtatgattatgtaatggcatctgagcga
acagaggaattttaccaacgctttattggactgttgcagtatgtattgccaggttatgtt
gccgaaggcaagtccagtgtcaccattgcgattgggtgtactggtggtcagcaccggtcc
gttgctttgaccgaacgggtggggcatgcactagctgatgactatcaagtacggattgcc
caccgggatgtggagaagcataagcaggaaaaggcaggaaagacgaatgaaaagtaa
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