Ligilactobacillus saerimneri: GTO87_03275
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Entry
GTO87_03275 CDS
T08336
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lsw
Ligilactobacillus saerimneri
Pathway
lsw03030
DNA replication
lsw03410
Base excision repair
lsw03420
Nucleotide excision repair
lsw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTO87_03275 (polA)
03410 Base excision repair
GTO87_03275 (polA)
03420 Nucleotide excision repair
GTO87_03275 (polA)
03440 Homologous recombination
GTO87_03275 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsw03032
]
GTO87_03275 (polA)
03400 DNA repair and recombination proteins [BR:
lsw03400
]
GTO87_03275 (polA)
Enzymes [BR:
lsw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GTO87_03275 (polA)
DNA replication proteins [BR:
lsw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GTO87_03275 (polA)
DNA repair and recombination proteins [BR:
lsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GTO87_03275 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GTO87_03275 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
BCAS2
HHH_2
NYN_YacP
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QLL77702
UniProt:
A0A7H9EK88
LinkDB
All DBs
Position
647724..650387
Genome browser
AA seq
887 aa
AA seq
DB search
MTGKNTRLLLVDGNSIIFRAFYAIRTQLTNHDGLHTNAIYGFKLMLDSVLTTYDPSHVLV
AFDAGKKTFRTEKYAAYKGQRDKTPSELTEQFGLVKELLQAYGITSYDLPNYEADDIIGT
MAAQAEAAGYDVTVVTGDRDLTQLATDKVTVAVTKSGVTQMENYTPAYVQEKLGVTPRQI
IDLKALQGDSSDNYPGVTGVGPKTAVKLIKQYESVEALYENLATMKKSKLKEHLEQDQAN
AFLAKDLARIRQDAPVAVTLADTQRQPVDIDQLVDLYQRLDFKRFLAEIHADQAGRADKK
SQLAVDILTNVQELTTVEYHDGDNLAFVIEVDGDNYHRAPLAGFAFKINDHYYASRDVTL
LQEKPLRNLLESATIPVDVFDSKQTYVALNRLGITLRQVNFDLLLVSYLLNNADNSKDMG
KLTQEHNYFELTSDEKLYGKGAKRALPADDAVFCGHLAQKTKAIHDLEQQLLTELQQNEQ
VPLYVDIERPLAIVLAQMEIAGVRVDTDKLMEMQSKFGERLAEIQTAIYAEAGEEFNLNS
PKQLGVILFEKLKLPVIKKTKRGYSTAVSVLEKLRGMAPIIDNILAYRQLSKLQSTYIEG
LLKVVAPEDGKVHTRYTQTLTATGRLSSVDPNLQNIPVRLEEGRQIRQAFVPSQPGWEIF
SSDYSQIELRVLAHVSGDHNMQQAFRDDFDIHTNTAMRIFGIDDPEQVTANQRRQAKAVN
FGIVYGISDFGLAQNLGISRQQAKRFITTYLENFPGVERYMREIVEYAREKGYVETILHR
RRYLPDIKSKNFNLRSFAERTALNTPIQGSAADIIKTAMIQMQDALQSRGLQARMLMQVH
DELIFEAPQEEIPLLEKVVPEVMDSAVQLDIPLKVESKHGATWFAAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaaaaaatacacggttgttattagtagatggtaacagcattatctttcgagcg
ttctatgctatccgaacacaattaactaaccatgatggtttgcataccaatgcaatttat
ggctttaaattgatgcttgatagcgttttgacaacttatgatccttcgcatgtgttggtt
gcatttgatgctggcaaaaagacctttcggacagagaaatatgcggcttacaaagggcaa
cgggacaagacaccgagtgaacttaccgaacagtttggtttggttaaagaactgctgcag
gcatacgggatcactagttatgatcttcccaattatgaagccgatgatattattgggacg
atggcggctcaggctgaagccgctggttatgatgtcactgttgtgactggggaccgtgac
ttgacccagttggcgacggacaaggtgacagtggcggtaactaagagtggggtaacccag
atggaaaactataccccagcatacgtgcaggagaagttgggggttactccgcggcaaatt
atcgacctaaaggcacttcaaggagattcatcagataattatccgggagtgactggggtc
ggtccgaagacagcggtaaaattaatcaagcaatacgaaagtgttgaagctttatatgaa
aacttagccaccatgaagaaatctaagctgaaagaacacctggaacaagaccaggccaat
gctttcttggctaaggacttagcgcgcattcggcaagatgccccggtagcagtaacactc
gctgatacccaacggcaacctgtcgatattgatcaactagtggacttataccagcgctta
gatttcaagcgctttttggcggaaattcatgctgaccaggccggacgagctgataaaaag
tcacaattagcagttgatattttgactaatgtgcaggaattaacaacagttgagtatcat
gatggcgataatttggcgtttgtgatcgaagtggatggtgataattatcaccgcgctccg
ttagccggttttgcctttaagatcaacgatcattattatgctagtcgtgatgttacttta
ttgcaggaaaaaccgttgcgcaacttattggaaagtgccactatcccagttgatgttttt
gatagcaagcagacctatgttgctttaaataggctaggaatcacattgcggcaagttaat
tttgacctcttactggtatcatacctcctcaataatgctgataatagcaaggatatgggg
aaattaacgcaagagcataattattttgaattaacaagcgacgaaaaattatacgggaaa
ggcgctaaacgggctttgccagcagatgatgcagtcttttgtgggcatctggctcagaaa
accaaggcaattcatgatctagagcaacagttgttaactgagctccagcaaaatgaacag
gtaccactctacgtagatattgagcgtccgctagcaatagtcttagcgcaaatggagatt
gctggggtccgggttgacacagataaactgatggaaatgcagagtaagtttggggagcgc
ctggctgagattcaaacagcaatttatgccgaagcgggcgaagagttcaacctgaattcg
ccaaagcaactgggagtaattttgtttgaaaagcttaaactaccagtaattaaaaagacg
aagcggggctattcaacagcagtcagtgttctggaaaaactacgggggatggcaccgatt
attgataatatcctggcataccggcaattgtccaagctacaatccacttatatcgaagga
ttgctcaaagtagttgctcctgaagatgggaaggttcatacccggtatacccagactttg
acggccacaggacggctatcgtcggtagatccaaatttacaaaatattccggtacggtta
gaagaaggccgccagattcgccaggctttcgttcctagtcaacctggttgggagatcttt
tcttctgattattcccaaattgaattgcgggttttagctcatgtttcaggagatcacaac
atgcaacaagctttccgggatgattttgatattcataccaatactgcaatgcggattttc
gggatcgatgatcctgaacaagtgacagccaaccaacggcgtcaggcaaaagcagttaac
tttgggattgtttatgggattagtgattttggcttggcccaaaatcttgggattagtcgc
cagcaggctaaacgttttattacgacgtatttagaaaacttccccggagtggagcgttat
atgcgtgagattgttgagtatgcacgcgaaaaaggttatgttgaaacgattctgcaccgg
cgacgctacctgccagatattaagagtaagaactttaatttacggtcatttgcggaacga
acagctctcaatacaccgatccaaggaagtgcagccgatattatcaagaccgcgatgatc
cagatgcaggatgctttgcaaagtcggggcttacaagcacgaatgctgatgcaagttcac
gatgaattaatttttgaagctccccaagaagaaattcctctgttagaaaaagtggtacca
gaggttatggattcagccgtgcagctggatattccattgaaggtggaaagcaaacacggg
gcaacatggtttgctgctaaataa
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