KEGG   Ligilactobacillus saerimneri: GTO87_04465
Entry
GTO87_04465       CDS       T08336                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
lsw  Ligilactobacillus saerimneri
Brite
KEGG Orthology (KO) [BR:lsw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsw03400]
    GTO87_04465
Enzymes [BR:lsw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     GTO87_04465
DNA repair and recombination proteins [BR:lsw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GTO87_04465
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII DEDDh_C
Other DBs
NCBI-ProteinID: QLL77925
UniProt: A0A7H9EL77
LinkDB
Position
863576..866371
AA seq 931 aa
MKLTDTFAVVDLESTGTSFETGDRIIQFSCVFVKNNKIINTFNTLINPEMKIPRETQNLT
GITNKDVRNAPYFEDVAGTIYSLLQDTNFVAHNIQFDYRFLNSELERVGYPMLDLACIDT
VQLAQVLFPTLSSYRLAELGSLLGIENKRPHRADSDAETTARIFIKLRNRLSSLPFPLLA
SLRPLASHLLYDTGILFINAYRNRKHRHQVLSNSFVEVGGILLRRPERQVTTIQPQVYPR
KVAQKRKLFGERLHLRNEQARMMDSIDRFWHSSQQKQQLVQAPTGMGKTYGFLLPTLYAV
SQGQKFVISTATMALQEQLLKTSLPVLTELTRIPVRALSLKGNSNYIDLARFAQSLNFPQ
NDNTCVLQMKILVWLSMTETGDFAELHLTTLQDNLFTTIEHHGLAALEQTSPFYEYDFVR
RQALALKSADIVVTNHAYLLQHAMELADFGANLIIDEGQDLVTTMTRVNRQVVDFDQVKI
LADTALVKMESHQSYSFENLVKIGVLSAKQYTTYLRQVQVIDHAVPSLRHRLLSHFVGGE
KLTEYTEKLLPASDLNDFIKSHSALVGQINRALPHLKAFGQWLENKRQQAQASGQIGREG
NELLRSVCSLLDEINEELAPWSRLCRGALQATPTKNQTWLTLAAHPTAHLRLTTGYLSGQ
DYLQQQVYQQFQRVLFMGADLVLPEIDDYMYRQLDLDRDALVETYQGPFDYQKQTITMVA
MDAPLVTEVPREEYIAYLADAIEQICQTPVQTLVLFNALDDIKEVYERLSERGFTQRRTV
LAQGINGGAEKLRKRFILGKDNANVLLGTGTFWEGIDLPHDQLQLLIVARLPFQSPDTEL
NQIRREDAQYNGLDPFSEVLLPEAILRLKQGWGRLIRTPHDQGAFVILDNRIYKKSYGYT
MRAAFPNEVQFKRYPTSQIGNMVAKFLAEDN
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgaagttgacagatacatttgcagtagtcgatctggagtcgacgggaactagtttcgaa
acgggggaccgcattatccagtttagctgcgtattcgtgaaaaataataaaatcatcaat
acatttaatactttaattaaccctgagatgaagattccccgcgaaacacaaaacctaacg
gggattactaataaagatgtccgcaacgccccatattttgaagacgtggcgggaaccatt
tattcattattacaagatacaaattttgtggctcataacattcagtttgattatcgtttt
ttgaatagtgaattggaaagagtggggtatccaatgttagatctggcctgtatcgatacc
gtccagttagcccaggtcttgtttccaaccttatcttcatatcggttggctgaacttggg
agcctgcttggaatcgaaaacaagcggccccaccgggctgatagtgatgcagaaacaacg
gcgcggatttttattaaactccgtaaccgtttgagcagtctaccatttccgttacttgct
tcattacgccccctggctagtcaccttttgtatgatactgggattctttttattaatgct
taccgtaatcgcaagcaccgccaccaagttttgagcaatagtttcgttgaagtaggcggg
attttgctacggcgcccagaacggcaagtgacaaccatccagccacaagtatatccgcgt
aaagttgcccaaaaacgtaagctttttggtgaacgcttgcacctgcgaaatgagcaagca
cggatgatggacagtatcgatcgtttttggcattcgtcccaacaaaagcaacagttagta
caagcaccaaccgggatgggaaagacctatggttttttattacctaccttatatgcagtg
agtcaggggcaaaaattcgttatcagtacggcaacgatggccttacaagaacaactactt
aaaacatccttaccagtcttgacagaattaacccggattccggtgcgggcattgtcgttg
aagggaaatagtaactatatcgacctagcacggtttgctcagtcactaaattttcctcaa
aacgataatacctgtgttttgcaaatgaagattctcgtgtggttgagtatgacagaaacc
ggggattttgcagaactccacctgaccacacttcaggacaacttatttacaacgatcgag
caccacggactagcagctctcgagcaaacaagtccgttttatgaatatgactttgtccgc
cgccaagccctagccctcaagagtgccgatatcgtagtgactaatcatgcgtatttgttg
cagcatgcaatggagttggctgactttggggccaatttgatcattgatgaagggcaagac
ttggtgacaacaatgacacgggttaaccggcaggtggtagactttgatcaggttaagatc
ctagccgatacggctttggtcaagatggagtcgcaccagtcgtattcgtttgagaattta
gtcaagataggggtgttatcggctaaacaatatacaacctatctccgccaggtccaagtg
attgaccacgctgttcctagcctccgtcaccggttgttgagccatttcgttggtggggaa
aagttgacggaatatacagaaaaactacttcctgcctcagacctcaatgactttattaaa
agtcacagtgctttggtgggacagatcaaccgggcattaccccatttaaaagcctttggc
caatggttagaaaataagcgtcagcaagcccaagcatctggacaaattggtcgtgaagga
aatgagttattgcgaagtgtatgttccttgttggatgaaattaacgaggaacttgctcca
tggagtaggttgtgccgtggggcgcttcaagcaacgccaaccaagaaccaaacttggttg
acgcttgcagcacatccaactgcccacttgcggttaactactggctaccttagtgggcaa
gactacttgcaacaacaagtctaccagcagttccaacgggtcttgtttatgggagctgat
ttggttctgccagagattgatgattatatgtaccgtcaacttgatttggatcgggatgcg
ctggtggaaacatatcaaggaccgtttgactatcagaagcaaacgatcacgatggtcgca
atggacgccccgttagtgaccgaggtaccacgggaagaatatatcgcttacttagcggat
gcgattgagcaaatttgtcaaacaccggttcaaaccttggtcctctttaatgctctggat
gacatcaaggaagtatatgagcgcttgagtgagcgggggttcacccaacgccgaacggtt
ctcgcccagggaattaacgggggagcagagaaattacgcaaacggttcatcctgggtaag
gataatgctaatgttctcttgggaacaggaactttttgggaaggaattgacttacctcat
gatcagctgcaactactgattgtggcacggttgccgttccaatcaccagatacagagctt
aaccagattcgccgggaagacgcccagtacaacgggttggatccctttagtgaagttctc
ctgccagaggctattttgcgtttgaaacaaggttggggccggttgattcgaacgccccat
gatcaaggcgcgtttgttattttggataaccggatctataagaaaagttatggatataca
atgcgggcggctttccctaatgaggtgcagtttaaacgttatccaactagtcagattgga
aatatggtggctaagtttttggctgaagataattaa

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