Ligilactobacillus saerimneri: GTO87_05340
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Entry
GTO87_05340 CDS
T08336
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
Organism
lsw
Ligilactobacillus saerimneri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
EcoEI_R_C
SWI2_SNF2
DEAD
Helicase_C
HSDR_N
DUF4145
AAA_19
CetZ_C
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QLL78076
UniProt:
A0A7H9EK96
LinkDB
All DBs
Position
complement(1043523..1046792)
Genome browser
AA seq
1089 aa
AA seq
DB search
MVKTNFDYENEELKIFVNAGKKAEKFIYQEPQEALAVFRRLAEALLTDVLEKDRVFAELR
ITANLYRTQDERIKLLKKYNAKIDPDSYPMNVIDAFYVVKNAGNIAAHELESSSFTVAKA
LKIDKLIYAIWSWYLEIYTYEETKAYVEPERIDPGNIQDLKKEIAELEKQRDNLQKQNEQ
QSDLLDRKQRKERLRKNRRYQQRQKLSEDQTRELIDNQLKQAGWQANTKELNYKKNHTMP
EKGQQMAIAEWYLPSSGKYIDYALFDGLKLVGIIEAKKWDEDISGDLSQAKEYASLVEER
PEVYHLTVDSANQYKVPFIYSTNGRSYVEQYRSKSGIWFRDTRNPYNHFRALAGWHSPED
LRALLNATSHQEADEALKKEANFQFADRYYQIAAIKAVEHAIIAKQDRILLQMATGTGKT
RTAIELMYHLLKTKRAKRILYLVDRNSLGKQTEDTLKNLKVDTTALAKIYNVKALTSGKP
DRSTKIHIATVQSMIRQLFDDNGTDKITVGAYDFIVVDEAHRGYTLDKEMTEGEERIYDE
QDYVSQYRRVIDYFDAVKIAMTATPAKHTVEIFGHAVYSYSYRQAVLDGYLVDHNTPYHF
KTELAQSGIELAKDDEVQVFDNETHKMGTETLADNVKFDVSQFNRQIIASGYNRAIAEKL
TDYVDPTDEMAGKTLIFAVTDKHADDVVIALKEAYEKAGIPVPDDAIQKITGQTYDYEQA
IKNFKNERYPSVVVTVDLLTTGIDVPEITNIVFLRQVRSRILYEQMIGRATRLCDRIHKD
SFNIYDAVGIYDKMKPVSNMNMVVSDPHHDVHYFVTQTDPTAYQDPDDFAQYRDDLVTAI
NRKLQRMPQEARSDFNEYIGFDVKAWVQTLEHKNPQELADQMPILTKLDNFKYQGRKVII
YDEKDQVTSVDRSYGEKNIRPEDYLQAFNAYVNSHKNELLGLEIIQTRPQDLSLKELNSI
VLELEQAGYNIKDLQSAEKKVKGEQTAANIISFIRRAMMTTNTLEDHEVMVKRAMNKVYG
MADWNVRQQKWLARIEKQLLENQILGKNARQAFDEITVFRQNGGYRRINKELGGKADEVV
ALINKNLYA
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaactaattttgattatgaaaacgaagaattaaaaatatttgttaatgccgga
aaaaaagccgaaaaattcatctatcaagaaccacaagaagcattggctgtttttaggcgg
ttggcagaagctttactgactgatgtcttggaaaaagatcgggtttttgcggaattgcgt
attaccgctaatttgtatcgaacccaggatgaacggatcaagttattaaagaagtataat
gctaaaattgatcctgatagctatccaatgaatgtgattgatgcattctatgtggttaaa
aatgctggtaacatcgctgcccatgagctggaaagttcatcttttactgttgctaaagca
ctaaaaatcgacaaactaatttatgctatctggtcctggtacctagaaatatatacatat
gaagaaactaaagcgtacgttgaaccggagagaattgatccgggtaatatccaagacctg
aaaaaagaaattgcagaattagaaaagcaacgggataacttgcaaaaacaaaatgaacag
caaagtgaccttcttgaccggaagcaaagaaaggaacgcttacgcaaaaataggcgctac
caacaacgacaaaagttgtctgaggatcaaacacgggaattgattgacaaccagctcaag
caagccggttggcaagccaatacgaaagaacttaactataagaaaaaccatactatgcca
gaaaaaggtcaacaaatggcaattgctgaatggtacttgccaagtagtggcaagtatatc
gactacgccttgtttgatggattaaagcttgtaggaattatcgaagccaaaaagtgggat
gaagatatttcgggcgacctctctcaggccaaggaatatgctagcctggtggaagaacga
ccagaagtctaccatttaacggtggatagtgctaaccagtacaaggtgccgtttatttat
tcgactaacggacggtcttatgttgaacagtacaggtcaaagtcagggatctggttccgt
gatacccgtaatccttacaatcattttcgggctttagctgggtggcattcacctgaagat
ctgcgggcgttgctcaacgcaacttcccaccaggaagcagacgaagcactgaaaaaggaa
gctaatttccagtttgctgaccgctattatcaaattgcggcaatcaaggccgttgagcat
gcgatcatcgctaaacaagaccggatcctcttgcaaatggcaactgggacggggaagact
cggacggcgatcgaattaatgtaccacctcttaaagactaagcgggccaaacggatctta
tatttagtcgaccgcaattctttaggaaagcaaacagaagatacccttaaaaatcttaaa
gttgacaccacagccctagcgaagatttataatgtcaaggcactaacgagtggaaagccg
gaccgtagcactaagattcatattgcaacggtgcaaagtatgattcggcaactttttgat
gacaatggcacggataaaattacggttggggcttatgattttatcgtggttgacgaggcc
caccgtggttacactttggataaggaaatgacagagggagaagagcggatttatgatgaa
caggactacgtcagccagtaccggcgggtaattgactactttgatgcggttaagattgcg
atgacggcaacgcctgctaagcacaccgtggaaatctttggtcatgcggtgtattcgtac
agttaccgccaggcagtattggacggttatttggttgaccataatactccgtaccacttc
aagacggagctggctcagagtggaattgagctggctaaagatgatgaggtgcaagtcttt
gataatgagacccataaaatggggacggaaacactagctgataatgtgaaatttgacgtc
agtcagtttaaccgccagatcatcgctagtggctataaccgggcaatcgcagaaaaactc
actgactacgttgatcctaccgacgaaatggcagggaagaccctgatttttgcggttacg
gacaagcacgccgatgacgtagtgattgctttgaaggaagcctatgaaaaagcgggcatt
cctgttccagatgatgccatccaaaagattacgggtcagacctatgactacgagcaagca
atcaagaacttcaagaatgagcgctacccaagcgttgtagtgacagtcgatctcttgacg
acagggatcgatgtcccagaaattaccaatatagtctttttacgccaggttcggtcgcga
attttgtatgaacaaatgatcggacgggccacccggttgtgtgaccggatccacaaggat
agttttaatatctatgacgccgtgggaatatatgacaagatgaagccggtatcgaatatg
aacatggtagttagtgatcctcatcacgacgtgcattattttgttacccaaacggacccg
accgcctaccaggatccagatgactttgctcagtaccgggatgacctggtgacagccatc
aaccgcaaattgcaacggatgccacaagaagctcggtctgattttaacgaatatattggt
tttgatgtcaaagcttgggtccaaacactggagcacaagaacccccaagaactggccgat
cagatgccaatcttaactaagctggacaacttcaagtaccagggtagaaaggtcattatt
tatgatgaaaaagaccaagtaaccagtgttgaccgatcctacggggaaaagaacattcga
ccggaagattacctccaggccttcaacgcctacgtcaattctcacaagaacgaactgctg
gggttagaaattattcagactcggccacaggatctgtcgctcaaagaactcaacagcatt
gtcttagagttggaacaagcaggttataacatcaaggacctgcaaagtgccgagaagaaa
gtcaagggggaacaaaccgctgccaatatcatcagctttatcagacgggcgatgatgacg
accaataccctggaggaccatgaagtcatggtcaagcgggcaatgaataaggtttacggg
atggctgattggaacgtccgtcagcaaaagtggctagcaagaattgaaaagcagctactg
gaaaatcaaattctcggtaagaacgcccgccaggcctttgatgagatcacagtctttagg
caaaatgggggctaccgccgaatcaacaaggagctgggcggaaaggctgatgaagtcgtg
gccttaattaataagaatttatacgcatag
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