Ligilactobacillus saerimneri: GTO87_05885
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Entry
GTO87_05885 CDS
T08336
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
lsw
Ligilactobacillus saerimneri
Pathway
lsw03030
DNA replication
lsw03430
Mismatch repair
lsw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTO87_05885 (ssb)
03430 Mismatch repair
GTO87_05885 (ssb)
03440 Homologous recombination
GTO87_05885 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsw03032
]
GTO87_05885 (ssb)
03400 DNA repair and recombination proteins [BR:
lsw03400
]
GTO87_05885 (ssb)
03029 Mitochondrial biogenesis [BR:
lsw03029
]
GTO87_05885 (ssb)
DNA replication proteins [BR:
lsw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GTO87_05885 (ssb)
DNA repair and recombination proteins [BR:
lsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
GTO87_05885 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
GTO87_05885 (ssb)
Mitochondrial biogenesis [BR:
lsw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
GTO87_05885 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
eIF-3_zeta
GRP
Peptidase_U49
Motif
Other DBs
NCBI-ProteinID:
QLL78172
UniProt:
A0A7H9ELL1
LinkDB
All DBs
Position
complement(1145308..1145865)
Genome browser
AA seq
185 aa
AA seq
DB search
MINRVVLTGRLTKDPELKYTQSGVAVASFTVAVDRQYRNQAGEREADFINCVIWRKSAEN
FVNFTHKGSKVGIDGRLQTRNYENQQGQWVYVTEVVVDSFSLLDSKHDNQNDQQNYGNQG
YQKQGGQQGGYQNQGNQQYNNGYQGNNQGQYQGNQQGYQGGQQNTGYMEPDPNQGRPINE
DDLPF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcgagttgtattaacaggacgacttactaaggatccagagttgaaatacacc
caaagcggggtggcagtagcgagctttaccgtggcggttgatcggcagtaccgaaaccaa
gcgggagaacgggaagcggattttattaattgcgtaatttggcgtaagtcagccgaaaac
tttgtcaactttactcataagggatctaaggttggcattgatggacgactgcaaacgaga
aactacgagaatcagcaggggcaatgggtttacgtgactgaagtagtggttgattcgttc
tcattattggattcaaaacatgacaaccagaacgatcagcagaactacggcaaccaaggc
tatcaaaaacagggtggtcaacagggtggttaccagaaccagggcaaccagcagtacaac
aacggttaccaaggtaataaccaaggtcagtatcagggtaaccaacaaggttaccaaggt
ggtcaacagaacactggttacatggaacctgatccgaatcaaggaagaccaatcaatgaa
gatgacctaccgttctag
DBGET
integrated database retrieval system
