Ligilactobacillus saerimneri: GTO87_06275
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Entry
GTO87_06275 CDS
T08336
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lsw
Ligilactobacillus saerimneri
Pathway
lsw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GTO87_06275 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsw03400
]
GTO87_06275 (ruvB)
Enzymes [BR:
lsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GTO87_06275 (ruvB)
DNA repair and recombination proteins [BR:
lsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GTO87_06275 (ruvB)
RecFOR pathway proteins
GTO87_06275 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_14
AAA_16
RNA_helicase
AAA_3
nSTAND3
Sigma54_activ_2
NTPase_1
AAA_18
TsaE
NB-ARC
AAA_24
Bac_DnaA
AAA_17
AAA_25
Rad17
NPHP3_N
DUF815
Parvo_NS1
IstB_IS21
AAA_19
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QLL78243
UniProt:
A0A7H9EKK0
LinkDB
All DBs
Position
complement(1207941..1208951)
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AA seq
336 aa
AA seq
DB search
MTEDERLVSGTSSDQAERTDELSLRPHLLSEYIGQTKLKDEIGVYVQAAKQREEALDHVL
LYGPPGLGKTTMASVIANEMGVNIKTTSGPAIEKNGDLVALLNELNPGDVLFIDEIHRLP
KAVEEVLYSAMEDFFIDIIIGQGPTAHAVHFPLPPFTLIGATTKAGMLSAPLRERFGIVG
HMKYYSVTELTAIVERSAAVFNSRIASSGAVEIARRSRGTPRIANRLLKRVRDFADVAQM
DEINAEIVDYALAMLRVDKKGLDETDRKLLTTMIELYDGGPVGVATLAANIGEETETIAD
MVEPYLMQIGFIKRTPRGRVATAAAYAHLGMKQTNK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggatgaacgcttagtttctggcacgagcagtgaccaggctgaacggacggac
gaactttccctccgcccccatttactgagcgaatatattggacagactaaactcaaagat
gaaattggggtctatgttcaggctgccaaacaacgggaagaagcgctcgaccacgtgctc
ttgtatggaccaccgggcttggggaagaccactatggcgagtgtgattgcaaacgaaatg
ggggttaatatcaaaaccacttcggggccggcgattgaaaagaacggtgatttggttgcc
ttattaaacgagcttaacccgggcgatgtcctatttattgatgaaattcaccgtttaccc
aaggcagtagaagaagtattatattctgcaatggaagatttctttattgatattatcatt
ggtcaaggaccgactgcccatgcagtccacttccccttaccaccatttacgctgattggg
gcgactaccaaagctgggatgctgtctgcaccgttgcgggaacggtttggaatagtggga
cacatgaagtattattcggttacggagctgacggccattgttgagcggtcagcagccgtt
tttaatagtcggattgctagcagcggggcggtcgagattgcccggcgatcacgggggacc
ccccggattgccaaccggctattgaagcgggtgcgtgactttgctgacgtggcccaaatg
gatgagatcaatgcggagatagttgactatgccctggcaatgttgcgggtcgataagaag
gggttggatgaaaccgaccgcaaattactgaccacaatgattgagctctatgatggtggt
ccggtcggggttgcaactttagcggccaacattggtgaagaaaccgagacaatcgcggat
atggttgaaccttatctcatgcaaattggttttattaagcgtactccacggggacgggta
gccacagcagctgcttatgcccacctgggaatgaagcaaacaaataaataa
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