Ligilactobacillus saerimneri: GTO87_07140
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Entry
GTO87_07140 CDS
T08336
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lsw
Ligilactobacillus saerimneri
Pathway
lsw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GTO87_07140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsw03021
]
GTO87_07140
03400 DNA repair and recombination proteins [BR:
lsw03400
]
GTO87_07140
Enzymes [BR:
lsw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GTO87_07140
Transcription machinery [BR:
lsw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GTO87_07140
DNA repair and recombination proteins [BR:
lsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GTO87_07140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
INTS7_HB
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QLL78378
UniProt:
A0A7H9EKX8
LinkDB
All DBs
Position
complement(1385367..1386311)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPKIHKIEENDGYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAITDIQIDGVL
HEFSTVEGVLEDVTQIILNLKKVALGIKSDDRVSLEIDVVGPMEVTAGDIQGSADVEIFN
PDQYICTVADGASFHVRMTANTGRGYVSAKENKEMADDMPIGVLPIDSIYTPIERVNYQV
EKTRVGQKNDYDKLTLDVWTNKSITPSEAVSLSAKVLTEHLSLFVNLTEEAMNAEMMVVT
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEADMMKVRNLGRKSLDEVK
EKLANLGLSLRQDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgaaaaaccaaaaattcataagattgaagaaaatgatggctacggcaag
tttgttatcgaaccgcttgaacgtgggtatggtacaactttaggtaactctttacgccgg
gtcttattatcttcattgccaggtgctgctattactgatatccaaatcgatggggttctc
catgaattctctaccgtcgaaggtgttctagaagatgttactcaaatcatcttgaactta
aagaaggttgcattgggtatcaagtcagatgatcgtgtatccttagagattgatgttgtt
ggtccaatggaagtaactgccggtgatatccaaggtagtgccgacgttgaaatcttcaac
ccagatcaatatatttgtactgtggctgatggagcttcattccatgttcggatgaccgct
aacacgggtcgtggttacgtttctgcaaaggaaaacaaagaaatggctgatgatatgcca
atcggtgttttaccaatcgattcgatttataccccgatcgaacgcgtgaactaccaagtt
gaaaaaacacgtgttggtcaaaagaacgattacgataagttgaccttagatgtttggact
aacaagtccatcacacctagtgaagctgttagcttatccgcaaaagtcttaactgaacac
ttgagtttgtttgttaacctgactgaagaagcaatgaatgctgaaatgatggttgtaact
gaagaaactcacaaagaaaagatgcttgagatgacaattgaagagcttgatctctctgtt
cgttcatacaactgcttgaagcgtgcaggtatcaatactgttcaagagttaactaataag
actgaagcagatatgatgaaggttagaaaccttggtcgcaagtctttggatgaagttaag
gaaaaattagcaaaccttggtttatcattacgccaagatgactaa
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