Agrilutibacter terrestris: H8B22_00675
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Entry
H8B22_00675 CDS
T07218
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
lsx
Agrilutibacter terrestris
Pathway
lsx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H8B22_00675 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsx03400
]
H8B22_00675 (sbcB)
Enzymes [BR:
lsx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
H8B22_00675 (sbcB)
DNA repair and recombination proteins [BR:
lsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H8B22_00675 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H8B22_00675 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H8B22_00675 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
TPR_9
Motif
Other DBs
NCBI-ProteinID:
QNP40816
UniProt:
A0A7H0FXQ0
LinkDB
All DBs
Position
142626..144068
Genome browser
AA seq
480 aa
AA seq
DB search
MPASFLFYDLETFGADPRTTRIAQFAAIRTDADLNEVDEPISIFVRPADDLLPSPIATLI
TGIAPQAALRDGMNEAQAFSLIFDEMARPETCTLGYNSLRFDDEFVRYGLFRNFYDAYER
EWRGGNSRWDLLDVLRLAHALRPDGLAWPQREDGATSFKLEHLAHANDVRIGDAHEALSD
VRALIGLARKLKQTQPRLWDYALKLRDKRFVASLVDVVAMTPLLHVSQRFPASRLCSAPV
LPLARHPRIDNRVIVFDLGQDPAALLRMSPEQIADRLYTPIADLPEGEERIALKEIHLNR
CPALVAWDHLRAADFTRLMIDPQVVAERAAILREAGPALAEKVRQVYSSERERARADADA
SLYDGFIGDGDKRVFAEVRATPPQALGMKGFGFRDPRLPELLFRYRARNWPDTLSVSERA
LWNDYRRSRLRDERGLSEYSFDTFRAEIAALRLAHAADGGKQVLLDQLEAWGHEVEAGLA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccagcttcctgttctacgacctcgagacctttggtgccgatccgcgcaccact
cgcatcgcgcagttcgccgcgatccgcaccgacgccgacctcaacgaggtcgacgagccg
atcagcatcttcgtacgcccggccgacgacctgctgccttcgcccatcgccacgctgatc
accggcatcgcgccgcaggccgcgctgcgtgacggcatgaacgaggcgcaggccttctcg
ctgatcttcgacgagatggcgcggcccgagacctgcacgctgggctacaactcgctgcgc
ttcgacgacgagttcgtccgctacggcctgttccgcaatttctacgacgcgtacgagcgc
gaatggcgcggcggcaatagccgctgggacctgctggacgtgctgcgcttggcgcatgcg
ctgcgtcccgacggcctggcctggccgcaacgcgaggacggcgcgacgtcgttcaagctc
gaacacctggcgcacgccaacgacgtgcgcatcggcgacgcgcacgaggcgctctccgac
gtgcgcgccctgatcggcctcgcgcgcaagttgaaacagacacagccccggctgtgggac
tacgccctgaagctgcgcgacaagcgttttgtcgcgagtctggtcgacgtggtggcgatg
acgccgttgctgcacgtctcgcagcgcttccctgccagccggctgtgctccgcgcccgta
ctgccgttggcgcggcatccgcgcatcgacaaccgggtgatcgtgttcgacctgggccag
gacccggccgccctgctgcggatgtcgcccgagcagatcgccgaccggctttacacaccg
atcgccgacctgcccgaaggcgaggagcgcatcgcgctcaaggaaatccacctcaaccgc
tgcccggccctcgtggcctgggaccacctgcgcgcggccgacttcacccgcctgatgatc
gatccgcaggtcgtggcggagcgcgccgcgatcctgcgcgaagcgggcccggcgctggcc
gagaaagtccgccaggtctattcgtccgagcgcgaacgcgcgcgcgccgacgcggacgcc
tcgctgtacgacggcttcatcggcgacggcgacaagcgcgtgttcgccgaagtgcgcgcc
acgccgccgcaggcattgggcatgaagggcttcggtttccgcgatccgcgcctgccggaa
ctgctgttccgctaccgcgcgcgcaactggccggacacgctgtcggtgagcgaacgggcg
ctgtggaacgactaccgccgctcgcgcctgcgtgacgaacgcgggctgtccgaatacagc
ttcgataccttccgcgccgagatcgcggcgttgcggctcgcccatgccgccgatggcggc
aagcaggtgctgctcgaccagttggaagcatggggccacgaggtcgaggccggcctggcc
tga
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