Agrilutibacter terrestris: H8B22_08660
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Entry
H8B22_08660 CDS
T07218
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lsx
Agrilutibacter terrestris
Pathway
lsx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H8B22_08660 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsx03021
]
H8B22_08660 (rho)
03019 Messenger RNA biogenesis [BR:
lsx03019
]
H8B22_08660 (rho)
Transcription machinery [BR:
lsx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H8B22_08660 (rho)
Messenger RNA biogenesis [BR:
lsx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H8B22_08660 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
Spore_III_AA
S1CSD-TOTE-2
AAA
AAA_22
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
QNP39601
UniProt:
A0A7H0FU85
LinkDB
All DBs
Position
complement(1888274..1889935)
Genome browser
AA seq
553 aa
AA seq
DB search
MSDNTPDSGETAEKRVRKARVVKADAAAPAATAEPTPQAAAPSAPREAAPAPSADTAGPA
PAGDQAQGNDNGQPREGRDFDNRGGGGNNRRDRFRNRRDRQRDRYRDGGMQDEGGGNETF
VPRPHPQVPEGFPVYSLGDLKRMPANKLLDIAEQLQIQEGVARARKQDVIFAVLKVLTRH
GEGVAADGVLEILPDGFGFLRSHEASYLAGPDDTYISPSQIRRFNLRTGDHLSGRIRWPK
DGERYFALAVVDTINGEPLEASKNKVLFENLTPLFPRRKFRLERGDGSTEDITGRILDLM
APQGKGQRALIVSPPKAGKTMLMQQVATAITTNHPDVHLIVLLVDERPEEVTEMQRTVRG
EVVSSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVL
TGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNSEVHL
DRRIAEKRVYPAININRSGTRREDLLIEPELLQKIWILRKLLHGMDEIGAMEFLLDKMKN
TKSNDEFFSSMKR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgataacacccccgattccggcgaaaccgccgagaagcgcgtgcgcaaggcacgc
gtcgtgaaggccgacgccgctgctccggccgccaccgccgaacccactccccaggccgcc
gcgccgtccgcaccgcgcgaagccgcgccggcgccgtccgccgataccgcgggccctgcg
cctgccggcgaccaggcccaaggcaacgacaacggccagccgcgcgaaggccgcgacttc
gacaaccgtggtggtggcggcaacaaccgccgcgaccgcttccgcaaccgccgcgaccgc
cagcgcgaccgctaccgcgacggcggcatgcaggacgagggcggcggcaacgagaccttc
gtgccgcgcccgcacccgcaggtgccggaaggcttcccggtctattcgctgggcgacctc
aagcgcatgccggcgaacaagctgctggacatcgccgagcagctgcagatccaggaaggc
gtcgcccgcgcgcgcaagcaggacgtcatctttgcggtgctcaaggtcctgacccgccac
ggcgaaggcgtcgccgccgacggcgtgctggaaatcctgcccgacggtttcggcttcctg
cgctcgcacgaggccagctacctggccggcccggacgacacctacatctcgcccagccag
atccgccgcttcaacctgcgcacgggcgaccacctgtccggccgcatccgctggcccaag
gacggcgagcgctacttcgccctggccgtggtcgacacgatcaacggcgagccgctggaa
gcgtcgaagaacaaggtcctgttcgagaacctgaccccgctgttcccgcgccgcaagttc
cgcctcgaacgcggcgacggttcgaccgaagacatcaccggccgcatcctcgacctgatg
gcgccgcagggcaaaggccagcgcgcgctgatcgtctcgccgcccaaggccggcaagacc
atgctgatgcagcaggtcgccaccgcgatcaccaccaaccacccggacgtgcacctgatc
gtcctgctggtcgacgagcgtccggaagaagtgaccgaaatgcagcgcaccgtgcgcggc
gaagtggtgtcgtcgaccttcgacgaacccgccgcccgccacgtgcaggtcgccgagatg
gtgatcgagcgcgccaagcgcctggtcgagcacaagaaggacgtcgtcatcctgctcgac
tcgatcacccgcctggcccgcgcctacaacaacgtggtgccgtcctcgggcaaggtcctg
accggtggtgtcgacgccaacgccctgcaccgcccgaagcgcttcttcggcgccgcgcgt
aacgtcgaggaaggcggttcgctgaccatcatcgcgactgcgctgatcgacaccggctcg
aagatggacgaggtgatctacgaagagttcaagggcaccggcaactccgaagtgcacctg
gaccgtcgcatcgccgaaaagcgcgtgtacccggcgatcaacatcaaccgctcgggcacc
cgccgcgaagacctgctgatcgaaccggagctgctgcagaagatctggatcctgcgcaag
ctgctgcacggcatggacgagatcggcgcgatggaattcctgctcgacaagatgaagaac
accaagtcgaacgacgagttcttcagttcgatgaagcgctga
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