Agrilutibacter terrestris: H8B22_10395
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Entry
H8B22_10395 CDS
T07218
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lsx
Agrilutibacter terrestris
Pathway
lsx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H8B22_10395 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsx03021
]
H8B22_10395 (rpoC)
03400 DNA repair and recombination proteins [BR:
lsx03400
]
H8B22_10395 (rpoC)
Enzymes [BR:
lsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H8B22_10395 (rpoC)
Transcription machinery [BR:
lsx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H8B22_10395 (rpoC)
DNA repair and recombination proteins [BR:
lsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H8B22_10395 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
DBD_Tnp_Mut
Motif
Other DBs
NCBI-ProteinID:
QNP39909
UniProt:
A0A7H0FV43
LinkDB
All DBs
Position
2255403..2259623
Genome browser
AA seq
1406 aa
AA seq
DB search
MKDLLNLFNQQRPAIDFDAIKIALASPDLIRSWSYGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAYVVTEPGLTPMERGMLLNEEQYMQARQEHGDDFEAAM
GAEAVYDLLRTIDLQSEMIQLKEDIASTGSETKLKRLTKRIKLVEAFLESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALMDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPY
LKLHQCGLPKKMALELFKPFIFAKLQRRGLATTIKAAKKLVEREEPMVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMASNNILSPANGEPIIVPSQDVVLGLYYMTRALENKAGEGMAFANVAEVKRAYDNR
AVQLHAKCKVRITETVVGEDGSRTKKTSIVDTTVGRALLREILPEGLPFALANVELTKKN
ISRLINSCYRMLGLKDTVVFADQLMYTGFSYATRAGVSIGIDDMKIPAEKKGILDEAEQE
VLDIQQQYQSGLVTAGERYNKVVDIWSRTNERVAKAMMDTIGTDSVANAKGEMVPQKSMN
SIYIMADSGARGSQAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITETDCGTLDGLTMTPIVEGGDVVEPLRDRVL
GRVVAEDVFLPGNDEDPIVTRNTLLDEAWVANLEDAGVQSIKVRSTITCQSSFGVCSHCY
GRDLGRGHLVNHGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAIDNVTVKTTGSIK
YNNLKFVEHSQGHRVAVSRSGELSVLDNHGRERERYKLPYGATIAVKDGAEIKAGQQVAN
WDPHNHPIVSEVAGFIRFIDFIDGVTVIEKTDELTGLASREITDPKRRGSQGKDLRPIVR
IVDKNGKDLSIPGTDLPAQYMLPPRSIVNLQDGAPVGVGDVVAKIPQEASKTRDITGGLP
RVADLFEARKPKDPAILAEISGVVSFGKDTKGKQRLIIKPVDGDEHEELIPKYRQIIVFE
GEHVEKGETVVDGEPSPQDILRLLGVEPLAVYLTKEIQDVYRLQGVKINDKHIEVIVRQM
LRKVEITDAGDSKFLNGEQVERQRFVEENARLQSKGEILSKADPVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTRDGLRGLKENVIVGRLIPAGTGLAYHTQRRRSASGLTESE
LETLAGGTVEAPVAAEGAEAEASTEE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctcaatctcttcaaccagcagcgccccgcgatcgacttcgatgcgatc
aagattgcgctggcttcgccggacctgatccgttcgtggtcgtacggcgaagtgaagaag
ccggaaaccatcaactaccgtaccttcaagcctgaacgcgacggcctgttctgcgccgcg
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtggtctgcgagaagtgcggcaccgaagtgacgctggccaaggtgcgccgcgag
cgcatgggccacatcgacctggcttcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgcatcggcttgatgctcgacatgaccctgcgcgacatcgagcgcatcctgtac
ttcgaagcctacgtggtgacggagccgggcctgaccccgatggaacgcggcatgctgctc
aacgaagagcagtacatgcaggcgcgccaggaacacggcgacgacttcgaggcggcgatg
ggcgcggaagcggtctatgacctgctgcgcacgatcgacctgcagtcggaaatgatccag
ctgaaggaggacatcgcctccaccggttcggaaaccaagctcaagcgcctcaccaagcgc
atcaagctggtcgaagccttcctcgaatccggcaaccgtccggagtggatggtcatgacc
gtgctgccggtgctgccgccggacctgcgcccgctggtgccgctggacggcggccgcttc
gcgacgtcggacctgaacgacctataccgccgtgtcatcaaccgcaacaaccgcctgcgt
cgcctgctcgaactcaacgcgcccgacatcatcgtgcgcaacgagaagcgcatgctgcag
gaatcggtcgacgcgctgatggacaacggccgtcgcggccgcgccatcaccggcaccaac
aagcgcccgctcaagtcgctcgccgacatgatcaagggcaagcagggccgcttccgccag
aacctgctcggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggtccgtac
ctgaagctgcaccagtgcggcctgccgaagaagatggcgctcgagctgttcaagcccttc
atcttcgccaagctgcagcgccgtggtctcgccaccacgatcaaggccgccaagaagctg
gtcgagcgcgaagagccgatggtgtgggacatcctcgaagaggtgatccgcgagcatccg
gtgctgctgaaccgcgccccgaccctgcaccgcctcggcatccaggcgttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcatccgctcgtgtgtacggcattcaacgccgac
ttcgacggtgaccagatggccgtgcacgtgccgctctcgctggaagcccagctggaagcg
cgcgcgctgatgatggcgtcgaacaacatcttgtcgcccgcgaacggcgagccgatcatc
gtgccgtcgcaggacgtcgtgctcggcctgtactacatgacccgcgccctggagaacaag
gcgggcgagggcatggcgttcgccaacgtggccgaagtcaagcgcgcctacgacaaccgc
gccgtgcagctgcacgccaagtgcaaggtgcgcatcaccgaaacggtggtgggcgaggac
ggttcgcgtaccaagaagacctcgatcgtcgacaccaccgtcggccgggcgctgctgcgc
gagatcctgccggaaggcctgccgttcgcgctggccaacgtcgagctgaccaagaagaac
atctcgcgcctgatcaactcgtgctaccgcatgctcggcctgaaggacaccgtggtgttc
gccgaccagctgatgtacacgggcttcagctacgcgacccgcgcgggcgtgtcgatcggc
atcgacgacatgaagatcccggccgagaagaagggcatcctggacgaagccgagcaggaa
gtgctcgacatccagcagcagtaccagtcgggcctggtcaccgccggcgagcgctacaac
aaggtcgtcgacatctggtcgcgtaccaatgagcgcgtcgccaaggcgatgatggacacg
atcggtaccgactcggtggccaacgccaagggcgaaatggtcccgcagaagtcgatgaac
tcgatctacatcatggccgactccggcgcgcgtggttcgcaggcgcagatccgccagctc
gccggtatgcgcggcctgatggccaagccggacggctcgatcatcgagacgccgatcacc
gcgaacttccgcgaaggcctgaacgtcctgcagtacttcatctcgacccacggtgcccgt
aagggcctcgcggataccgcgctgaagaccgcgaactccggttacctgacccgtcgcctc
gtcgacgtggcgcaggacgtggtcatcaccgaaaccgattgcggcacgctcgacggcctg
accatgaccccgatcgtggaaggcggcgacgtggtcgagccgctgcgcgaccgcgtgctg
ggtcgcgtcgtggccgaggacgtgttcctgccgggcaacgacgaggatccgatcgtcacc
cgcaacacgctgctcgacgaagcctgggtcgcgaatcttgaagacgccggcgtgcagtcg
atcaaggtgcgttcgacgatcacctgccagagctcgttcggcgtgtgctcgcactgctac
ggtcgcgacctcggccgcggccacctggtcaaccacggcgaagcggtcggcgtcgtcgcc
gcgcagtcgatcggtgagccgggtacccagctgaccatgcgtacgttccacatcggtggt
gcggcgtcgcgtgcggccgccatcgacaacgtgacggtcaagaccaccggttcgatcaag
tacaacaacctcaagttcgtcgagcacagccagggtcaccgcgtggccgtgtcgcgttcg
ggcgaactgtcggtcctcgacaaccacggccgcgagcgcgagcgctacaagctgccgtac
ggtgcgaccatcgcggtcaaggacggcgcggaaatcaaggccggccagcaggtcgccaac
tgggatccgcataaccacccgatcgtgtcggaagtggccggcttcatccgcttcatcgac
ttcatcgacggcgtcaccgtcatcgagaagaccgacgaactgaccggcctggcttcgcgc
gaaatcaccgatccgaagcgtcgcggttcgcagggcaaggacctgcgcccgatcgtgcgc
atcgtcgacaagaacggcaaggacctgtccatccctggtaccgacctgccggcgcagtac
atgctgccgccgcgctcgatcgtgaacctgcaggacggtgcgccggtcggcgtcggcgac
gtggtcgcgaagatcccgcaggaagcgtcgaagacccgcgacatcaccggtggtctgccg
cgcgtggccgacctgttcgaagcgcgcaagccgaaggacccggcgatcctcgccgaaatc
tcgggcgtggtttcgttcggcaaggacaccaagggcaagcagcgcctgatcatcaagccg
gtcgacggtgacgagcacgaagagctgatcccgaagtaccgccagatcatcgtgttcgaa
ggcgaacacgtggagaagggcgaaaccgtggtggacggcgaaccgagcccgcaggacatc
ctgcgcctgctcggcgtcgagccgctggccgtgtacctgaccaaggaaatccaggacgtc
taccgcctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatg
ctgcgcaaggtcgagatcaccgacgccggcgacagcaagttcctcaatggcgagcaggtc
gagcgccagcgcttcgtcgaggaaaatgcccgcctgcagtcgaagggcgagatcctgtcc
aaggccgatccggtcctgctgggcatcaccaaggcctcgctggcgaccgagtcgttcatc
tcggcggcgtcgttccaggaaaccacccgcgtcctcaccgaggcggcggtccgcggcacc
cgcgacggcctgcgcggcctgaaggagaacgtgatcgtcggtcgcctgatcccggccggt
accggcctggcgtaccacacccagcgccgccgttcggcctccggcctgaccgagtccgaa
ctggagacgctggccggcggcacggtcgaggctccggtcgcggccgagggtgcggaagcc
gaggcttcgaccgaagagtaa
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integrated database retrieval system
