Agrilutibacter terrestris: H8B22_14110
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Entry
H8B22_14110 CDS
T07218
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lsx
Agrilutibacter terrestris
Pathway
lsx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H8B22_14110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsx03019
]
H8B22_14110
Enzymes [BR:
lsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H8B22_14110
Messenger RNA biogenesis [BR:
lsx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H8B22_14110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QNP40580
UniProt:
A0A7H0FX14
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All DBs
Position
3008000..3009304
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AA seq
434 aa
AA seq
DB search
MSFESLGLAPALLRALSENNYTTPTPIQAEAIPLALAGRDVLGGAQTGTGKTAAFGLPVL
NRLAKATPPSGPRKPRALILTPTRELALQVSDSLRGYAKHLRLNISAIYGGAGMQPQVDN
LRRGVDVLVACPGRLIDHLERGTARLDNIEVLVLDEADRMLDMGFLPAIKRILGKLPAQR
QTLLFSATFEARIKALALEFMRDPRQVQIAAQNTIAETIAHRAHPVDASRKRDLLVDILA
KRHTEQVMVFGKTKHGCNRLAEQLETAGLSAAAIHGNKSQAQRQKALAQFKAGKVRVLVA
TDVAARGLDIANLPLVINYDLPMVAEDYVHRIGRTGRNGASGEALSLVAPEEGGLLRQVQ
NMLKAPVELVTVEGFEPSRPIQMNAPLPKHGNQRPARGHRPHGKPAQRHAHAGGPKRNGN
SSGRAAAPRRDSRG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgaatcgctcgggcttgcgcccgcgctgctgcgcgcgctgtccgaaaacaac
tacaccacgccgaccccgatccaggccgaagccatcccgctggcgctcgccggccgcgac
gtcctgggcggcgcccagaccggcaccggcaagaccgccgcgttcggcctgccggtgctc
aaccgcctcgccaaggccacgccgcccagcggcccgcgcaagccgcgcgcgctgatcctc
accccgacccgcgaactcgcgctgcaggtcagcgacagcctgcgcggctacgccaagcac
ctgcgcctgaacatcagcgcgatctacggcggcgccggcatgcagccgcaggtcgacaac
ctgcgccgcggcgtggacgtgctggtcgcctgcccgggccgcctgatcgaccacctcgag
cgcggcacagcgcgcctggacaacatcgaagtgctggtgctcgacgaagccgaccgcatg
ctcgacatgggcttcctgccggcgatcaagcgcatcctcggcaagctgccggcgcagcgg
cagacgctgctgttctcggcgacgttcgaggcgcggatcaaggcgctggcgctggaattc
atgcgcgatccgcgccaggtccagatcgccgcgcagaacaccatcgccgaaaccatcgcg
caccgcgcccacccggtggacgcctcgcgcaagcgcgacctgctggtcgacattctggcc
aagcgccacaccgagcaggtgatggtgttcggcaagaccaagcacggctgcaaccgcctg
gccgaacagctggaaaccgccggcctcagcgccgccgcgatccacggcaacaagagccag
gcgcagcggcagaaggcgctggcccagttcaaggccggcaaggtgcgcgtgctagtggcg
acggacgtggccgcacgcggcctggacatcgccaacctgccgctggtgatcaactacgac
ctgccgatggtggccgaggactacgtgcaccgcatcggtcgtaccggccgcaacggcgcc
agcggtgaagcgctgtcgctggtcgcgccggaagaaggcggcctgctgcgccaggtgcag
aacatgctcaaggccccggtcgaactggtgacggtggaaggcttcgagccgagccggccg
atccagatgaacgcaccgctgccgaagcatggcaaccagcgtccggcgcgtggccaccgc
ccgcacggcaagcccgcgcagcgccacgcccacgccggcggcccgaagcgcaacggcaac
agcagcggccgtgctgcggccccgcgccgcgacagccgcggctga
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