Agrilutibacter terrestris: H8B22_14225
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Entry
H8B22_14225 CDS
T07218
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lsx
Agrilutibacter terrestris
Pathway
lsx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H8B22_14225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsx03019
]
H8B22_14225
03009 Ribosome biogenesis [BR:
lsx03009
]
H8B22_14225
Enzymes [BR:
lsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H8B22_14225
Messenger RNA biogenesis [BR:
lsx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H8B22_14225
Ribosome biogenesis [BR:
lsx03009
]
Prokaryotic type
rRNA helicases
H8B22_14225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QNP40601
UniProt:
A0A7H0FX35
LinkDB
All DBs
Position
complement(3029753..3031744)
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AA seq
663 aa
AA seq
DB search
MSAPAPPTPPTTDAPSVKFADLGLPESLLKALAEVGYETPSPIQAATIPPLLGGRDVLGQ
AQTGTGKTAAFALPILARIDPSQQKPQALVLAPTRELAIQVAEAFQKYAHHLPGFHVLPI
YGGQSYTPQLASLKRGVQVVVGTPGRVIDHLDRGSLDLSQLRCLVLDEADEMLRMGFIDD
VEAVLKKIPETRQVALFSATMPQQIKRIATTYLRDPVEVAIKTTTTTAANIRQRYWAVSG
VNKLDALTRILEAEPYDAMIVFSRTKLGTQELADKLSARGISAAAINGDLDQKARERTIA
QLKDGKIDVLVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRKGEAILFV
APRERGMLRAIERATRQPIEPMALPSVETVNEQRVSKFLGRITTALESTELAMFRDLVER
YEREQNVPAVEIAAALAKVVQGDMPLLLQATAEQLRPHREGFDKPGFDRSDRKPSFDKPG
FGQRMSERARGDFDGPRSGKFERDRPRPPRDEYPAANAGADRANPRNDAESFFDDEAPRA
PRPPREERGAPEAGMETFRIEVGHRHGVKPGNIVGAIANEAELESRYIGRIDIRDDFSLI
DLPEGMPREVMEHLKRVRVAGQPLRISRPGEGGGSGGGYQRGDGGPRPPRGPRPGGHKPR
RQG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccccgcccccccgactcccccgaccacggacgccccgtccgtgaaattcgcc
gatctcggcctgcccgaatcgctgctcaaggcgctggccgaagtcggttacgaaaccccc
tcgccgatccaggccgcgaccattccgccgctgctgggcggccgcgacgtgctcggccag
gcccagaccggcaccggcaagaccgcggccttcgcgctgccgatcctcgcccgcatcgac
cccagccagcagaagccgcaggccctggtactggcgccgacgcgtgaactcgccatccag
gtcgccgaagccttccagaagtacgcccaccacctgcccggcttccacgtgctgccgatc
tacggcggccagagctacaccccgcagctggcctcgctcaagcgcggcgtgcaggtcgtg
gtcggcacccccggccgcgtgatcgaccatctcgaccgcggctcgctcgacctgtcgcag
ctgcgctgcctggtcctcgacgaagccgacgagatgctgcgcatgggcttcatcgacgac
gtcgaggccgtgctgaagaagatcccggagacgcgccaggtcgcgctgttctccgcgacg
atgccgcagcagatcaagcgcatcgccaccacctacctgcgcgacccggtcgaagtggcc
atcaagaccacgaccaccaccgccgccaacatccgccagcgctactgggcggtgagcggc
gtcaacaagctcgatgcgctcacccggatcctggaagccgagccctacgacgcgatgatc
gtcttctcgcgcaccaagctgggcacgcaggaactggccgacaagctgtccgcgcgcggc
atctccgccgccgccatcaacggcgacctggaccagaaggcgcgcgagcgcaccatcgcc
cagctcaaggacggcaagatcgacgtgctggtcgctaccgacgtcgccgcgcgcggcctc
gacgtggagcggatcagccacgtgctgaactacgacatcccgtacgacaccgagagctac
gtccaccgcatcggccgcaccggtcgcgcgggccgcaagggcgaggcgatcctgttcgtc
gccccgcgcgaacgcggcatgctgcgcgcgatcgagcgcgccacgcgccagccgatcgaa
ccgatggcgctgcccagcgtggagaccgtgaacgagcagcgcgtgtcgaagttcctcggc
cgcatcaccaccgcgctggaaagcaccgagctggcgatgttccgcgacctggtcgagcgc
tacgagcgcgagcagaacgtgccggcggtggagatcgccgcggcattggccaaggtggtc
cagggcgacatgccgctgctgctccaggccaccgccgagcagctgcgcccgcaccgcgaa
ggcttcgacaagcccggcttcgaccgcagcgaccgcaagcccagcttcgacaagcccggg
ttcggtcagcgcatgtcggaacgcgcgcgcggcgatttcgacggcccgcgcagcggcaag
ttcgaacgcgaccgcccgcgcccgccgcgcgacgagtacccggccgcgaacgccggcgcc
gatcgcgcgaacccgcgcaacgatgccgagtcattcttcgacgacgaggccccgcgcgca
ccgcggccgccgcgcgaggaacgcggcgcacccgaggccggcatggagacgttccgcatc
gaggtcggccaccgccatggcgtgaagccgggcaacatcgtcggcgcgatcgccaacgaa
gccgaactggaaagccgctacatcggccgcatcgacatccgcgacgacttcagcctgatc
gacctgcccgaaggcatgccgcgcgaggtcatggaacacctcaagcgcgtgcgcgttgcc
ggccagccgctgcgcatcagccgcccgggcgaaggcggcggtagcggcggtggctaccaa
cgcggcgacggcggcccgcgccctccccgcggtccacgaccgggcgggcacaaaccgcga
cgtcagggctga
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