Lysobacter soyae: H8L67_01295
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Entry
H8L67_01295 CDS
T10230
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lsy Lysobacter soyae
Pathway
lsy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H8L67_01295 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsy03400
]
H8L67_01295 (xth)
Enzymes [BR:
lsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H8L67_01295 (xth)
DNA repair and recombination proteins [BR:
lsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H8L67_01295 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QYR53186
UniProt:
A0ABX8WQS2
LinkDB
All DBs
Position
268808..269620
Genome browser
AA seq
270 aa
AA seq
DB search
MRILSFNANGLRSAASKGFFDWFRTQDIDVMAVQETKAQAHQLTGELFNPEGYHVHFRDS
TVKKGYSGVAIYSRRAPDRILTSLDRPDFDEEGRYIEAQFGNLSVVSFYIPSGTSGELRQ
GLKEDVMQWLAPKLEAWRTSGREYVLCGDWNIVRSERDIKNWKSNQKNTGCLPHERAWLN
GLIADAYGDGSTQPTDGWHDSFRVARPDDIEYSWWSQRGGSRGKDVGWRIDYQLLTPKLA
QHVKSAQHFREPYFSDHAPYLVELDWNDNA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcttgagtttcaacgccaacggtctgcggtccgcagccagcaaaggctttttc
gactggttccggacacaggacatcgatgtcatggcggtgcaggaaaccaaagcacaggcg
catcaactgaccggcgaattgttcaatcccgagggctatcacgtccatttccgcgattcg
acggtgaagaagggttatagcggcgtcgccatttattcacggcgcgcgccggaccgaatt
ctcaccagcctcgatcggccggatttcgatgaagaagggcggtatatcgaagcgcaattc
ggcaacttgagcgttgtgtcgttttacatcccgtccggcacctccggtgaattgcgccaa
gggctgaaggaagacgtcatgcagtggctcgcgcccaagctcgaggcctggcgcacgagt
ggacgcgagtacgttttgtgcggtgattggaacatcgtgcgttccgagcgcgatatcaaa
aattggaagagcaatcaaaaaaacaccggttgcctgccgcatgagcgcgcttggttgaac
ggattgatcgccgatgcatacggcgatggcagtacgcagcccaccgacggttggcatgac
agttttcgcgtcgcgcgcccggacgacatcgaatacagctggtggagccaacgcggcggc
tcgcgtggcaaagacgtgggctggcgcatcgattaccaattgctcacacccaagctcgca
cagcacgtgaaaagcgcacagcattttcgtgagccgtatttctcggaccacgccccttat
ctcgtagaactcgactggaacgacaacgcatga
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