Lysobacter soyae: H8L67_02520
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Entry
H8L67_02520 CDS
T10230
Name
(GenBank) rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
lsy Lysobacter soyae
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsy03009
]
H8L67_02520
03016 Transfer RNA biogenesis [BR:
lsy03016
]
H8L67_02520
Ribosome biogenesis [BR:
lsy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H8L67_02520
Transfer RNA biogenesis [BR:
lsy03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
H8L67_02520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
PKS_DE
Motif
Other DBs
NCBI-ProteinID:
QYR53404
LinkDB
All DBs
Position
542634..543440
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AA seq
268 aa
AA seq
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MSSDIWKNARSGPSGERERSASTRAKELRLHGLNAVLAMFTATPERLRKLYLSESRLTDL
KDVLKWCVQHRVGYRVVEDGDLSKLAQTSHHEGVVADVLPPQERTLEAWLAEVGGVESVC
AIWLDGVGNPHNLGAIMRNAAHFGASAMLIEATAVNPISGASARVAEGGAERISVVRLPS
DAKRAMPLLRDAGFGLVATLVRDGADVYKTDLPAKLIYVMGAEQQGMHKGLAQACDVQVS
IPGTGEVESLNVASATAVFLAEWYRRRN
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggacatctggaaaaatgcgcgcagcggcccgtcgggtgagcgcgagcgatcg
gcaagtacgcgcgcgaaggagctgcgcttgcatggtttgaatgctgtgcttgccatgttc
accgcgacgcccgagcgtcttcgcaaactttatctgtcagaaagtcgcctgactgacttg
aaggatgtcctcaagtggtgcgtgcagcaccgtgtgggctatcgcgtcgtcgaggacggt
gacctgtcgaagctcgcgcagacctcgcatcatgaaggcgtggtggccgatgtattgccg
cctcaggagcgaaccctcgaggcctggttggccgaagtcggtggcgtcgaaagcgtctgc
gccatttggttggacggtgtcggcaatccgcataacttgggcgccatcatgcgcaacgcc
gcgcacttcggtgcttcggccatgttgatcgaggcgacggccgtcaatccgatatcaggt
gcctctgcgcgtgttgctgaaggtggtgccgagcggatttcggttgtgcgtctgccgtcg
gatgcaaaacgtgccatgccattgctgcgcgacgccggctttggtttggtggccactttg
gttcgcgatggtgccgacgtgtacaagacggatttgccggcaaaactcatctatgtgatg
ggcgccgaacaacaaggcatgcacaaaggcttggcgcaagcttgcgacgtgcaagtgtcc
attcccggcaccggcgaagtggaaagtttgaatgttgcgtcggcgactgcggtttttctg
gccgagtggtatcgccgacgcaattga
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