Lysobacter soyae: H8L67_04135
Help
Entry
H8L67_04135 CDS
T10230
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
lsy Lysobacter soyae
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsy03009
]
H8L67_04135 (dbpA)
Enzymes [BR:
lsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H8L67_04135 (dbpA)
Ribosome biogenesis [BR:
lsy03009
]
Prokaryotic type
rRNA helicases
H8L67_04135 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QYR53685
LinkDB
All DBs
Position
complement(867461..868843)
Genome browser
AA seq
460 aa
AA seq
DB search
MDDTSDFSTLALSPQLKSGLDALGYSKMTAVQALSLPSILAGRDLIAQAPTGSGKTAAFG
LGLLQQMDAGRSGTQALVLCPTRELADQVGKQLRKLAIGIPNLKLSILCGGIPLAPQLAS
LTHAPHIVVGTPGRVLELTEKGALDLSAVSVFVLDEADRMLDMGFEEDIRALSKRMPKQR
MGLLFSATFPDAIRALGTALLRDPVEVAVDAIEHRPDITARFIHTDPAKRVQQLAALLMQ
YRPQSTVVFCNMRRDTVEVEQSLSHYGFSALSLHGDMEQRDREEVLVRFANRSCSVLVAS
DVAARGLDIDGIDAVINYELPTDADTYLHRIGRTGRAGRAGLALSLVADSEDGRARVIDL
HLGKATPWETVAAIEGRPRAVPQAPMVTLRIDAGRTDKLRPGDIVGALTGDVGLKKEAIG
KIDVFATRSYVAIAHPQAGQTLEKLRNGKIKGRKLRVHRL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacctctgatttctcgacccttgccctttcaccacagctgaagtccggcctt
gatgcgctgggctacagcaaaatgaccgcggtccaagcgctttcgctgccgtccattctg
gccgggcgcgacctgattgcccaagccccaaccggcagcggtaaaacggctgcgtttggc
ttgggcttgcttcagcaaatggatgccggacgcagtggaacccaggcgttggtgctctgc
ccgacccgtgagttggccgatcaggtcggcaagcagttgcgaaaattggccatcggcatt
cccaacctcaaactgtccattttgtgcggcggcattcctctggcaccgcaattggcttct
ttgacccatgcaccgcacatcgtggtcggcacaccggggcgcgtgcttgagctgaccgaa
aaaggtgcactggacctatccgccgtctcggtgttcgtgctcgacgaagctgatcgcatg
ctggatatgggtttcgaggaagatatccgtgctttgtccaagcggatgccgaagcaacgc
atgggcctgttgttttccgcgacattcccggacgcgattcgtgcattgggcacggctttg
ttacgcgatccggtggaagtcgctgtggatgccattgaacaccggccggacatcacggca
cgattcatccataccgatccggcgaagcgtgtgcagcagctggcggccctgttgatgcag
tatcgaccgcaatccaccgtcgttttctgcaacatgcgccgcgatacggtggaggtcgaa
cagtccctgtcgcattacggtttcagtgccttgagtttgcacggcgatatggaacagcgc
gatcgcgaggaagttttggtgcgcttcgcgaatcggagctgttcggtcttggtcgcgagc
gatgtcgccgcgcgcggtctggacatcgacggcattgacgcggtgatcaattacgaactg
ccgaccgatgccgacacttacttgcaccgcatcggacgcacgggacgcgccgggcgcgcc
ggactcgccttgagcctggtcgccgacagcgaagatggccgcgcacgggtcatcgacttg
cacttgggcaaagcgactccttgggagacggtggccgccatcgaaggacgcccgcgtgcc
gtgccgcaggcgccgatggtgaccttgagaatcgatgccggtcgcactgacaagttgagg
cccggtgacatcgtcggtgccttgaccggtgatgttggcttgaagaaagaagccatcggc
aagattgatgtgtttgcaacgagaagctatgtggccatcgcccacccgcaggccggccaa
acgctcgagaaacttcgcaacggcaagatcaaaggccggaaattgcgcgtccatcgcctc
tga
DBGET
integrated database retrieval system
