Lysobacter soyae: H8L67_04625
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Entry
H8L67_04625 CDS
T10230
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
lsy Lysobacter soyae
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsy03009
]
H8L67_04625
Enzymes [BR:
lsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
H8L67_04625
Ribosome biogenesis [BR:
lsy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H8L67_04625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
CSD_RNase_II
RluD_N
HOK_GEF
Motif
Other DBs
NCBI-ProteinID:
QYR53936
UniProt:
A0ABX8WSX3
LinkDB
All DBs
Position
963790..964719
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AA seq
309 aa
AA seq
DB search
MVTVPDDRDGQRLDNFLLGQLKGVPKSLIYKLLRSGQVRVNGGRVKAERKLVAGEVVRIP
PISMPDENAERPEVAQGLLKVLERAIVFEDARLLAINKPTGLASHGGSGIRHGAIEAMRA
LRPNDNLELVHRLDRDTSGLLVFAKKRSALRELQALLREDHGAGIEKRYMALLVGRMPDG
TMHVDAPLHVGLRQGGERHVQVNPQGKPSISHFKVLQRLDGHSLCEVRIETGRTHQIRVH
AQHIGYPVAGDEKYGDETVNKRFKTKYGLKRLFLHAASLKFRLNEGRDEYVLDAPLSDDL
RQVLDEMAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggttccggatgatcgggacggccagcggctggacaattttctgctgggtcag
ctgaagggcgtccccaagtcactcatttataagctgctgcgttcgggccaggtgcgtgtc
aatggcgggcgggtcaaagccgagcgcaagctggtcgcaggcgaggtcgtgagaatcccg
ccaatctcaatgcctgatgagaacgcggaaaggcctgaagtcgcccaaggcttactaaag
gtgttggagcgcgcgattgtctttgaagatgcgcgcctcctggccatcaacaagccgacc
ggattggccagccacggtggcagcggcattcgccacggggcgatcgaagccatgcgtgcg
ctacggcccaacgacaatctcgagttggttcaccggctggatcgcgatacctccggcctg
ctggtgttcgcaaagaagcgctcggccctgcgcgaattgcaagcgctgctgcgggaagac
cacggggcgggtatcgaaaagcgctacatggccctgctggtgggccggatgcccgatggc
accatgcatgtggacgcgccgctgcacgtgggtttgcgtcagggcggtgaacgccatgta
caggtcaacccgcaaggcaagccgtcgatcagccacttcaaagtcttgcagcgtctggac
ggccattcgctctgtgaagtgcggattgaaaccgggcgcacccaccaaattcgcgttcac
gcccaacacatcggctatccggtggccggcgatgagaaatacggcgacgaaaccgtcaac
aagcgtttcaagacgaagtacggcctgaaacgcttatttctgcatgcggcgtcgttgaag
ttccgtttgaacgaaggtcgcgacgaatacgtgctcgatgcgccgttgtcggacgatctg
cgccaggtgctggacgaaatggccggctag
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