Lysobacter soyae: H8L67_07075
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Entry
H8L67_07075 CDS
T10230
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lsy Lysobacter soyae
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsy03016
]
H8L67_07075 (truD)
Enzymes [BR:
lsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
H8L67_07075 (truD)
Transfer RNA biogenesis [BR:
lsy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H8L67_07075 (truD)
Prokaryotic type
H8L67_07075 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QYR53970
LinkDB
All DBs
Position
complement(1467875..1468897)
Genome browser
AA seq
340 aa
AA seq
DB search
MPRDGAAVIEHARLRSKPEDFQVDELPAFEASGAGEHLLLSLKKRGLTTHELITQVATWA
GVPTSAIGYAGLKDKHAVTTQRLTVWLPKRVSPDPATLNGDAIALIDAHWHNRKLPSGAL
KGNRFRLVLRELKGDVERIRQRLDDIATHGVPNYFGAQRFGRAGDNVAQARQMFAGTRVG
RETRSLLLSAVRSEMFNQVLARRVVEGNWRTAIAGDVFMRDGSQSIFGPVDADADIHARL
AAGAIHPTGPMWGRGELRTRDAAQALETAVLMNVANTDLRAGLEQAGLKQERRSLRLAVR
ELRAEFDADTLTLQFDLDPGSYATTVMHALGAVVDASRAA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgccccgcgatggcgcggccgtcatcgaacatgcaaggcttcgatccaagccggaggat
ttccaagtcgacgaactgccggcgttcgaagccagcggcgccggcgaacacctgttgctg
tcgctgaaaaaacgcggtctcaccacccatgagttgatcacgcaggtagcgacatgggcg
ggcgtgccgacgtctgcgatcggttacgccggcttgaaggacaagcatgctgtcaccacg
cagcgcctcacggtctggctgcccaagcgcgtttcaccggatccggcaacattgaatggt
gacgccattgcgctcattgacgcgcattggcataaccggaaactaccgagcggtgcgttg
aagggcaatcgctttcgattggtgttgcgtgagctgaaaggcgatgtcgaacgaatccgg
caacgcctcgatgacatcgccacgcacggggtgccgaattattttggtgcgcaacgtttt
ggtcgtgctggtgacaatgtggcgcaagcccgtcagatgtttgccggcacgcgggtcggg
cgtgaaacgcgcagtttgttgctctcggcggtgcgctccgagatgttcaaccaagtgctg
gctcgacgtgttgtcgagggcaattggcgcaccgcgatcgccggggatgtgttcatgcgc
gacggaagccagagcatcttcggccccgtcgatgccgatgcggacatccacgcacgtctc
gctgccggtgccatccatcccaccggtccgatgtggggcaggggtgagctgcgcacgcgc
gatgcggcgcaggcgttggaaacggcggtgctaatgaacgttgccaataccgatctgcgc
gccggcttggaacaagcgggtttgaagcaggaacgccgtagtctgcgattggcggtgcgc
gaattgcgtgccgagttcgacgcagacacgctcaccctgcaatttgacttggatccggga
agttacgcgacgacggtgatgcatgcgctcggcgcggtggtcgacgcatcgcgcgccgca
taa
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