Lysobacter soyae: H8L67_07315
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Entry
H8L67_07315 CDS
T10230
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lsy Lysobacter soyae
Pathway
lsy03018
RNA degradation
Brite
Enzymes [BR:
lsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H8L67_07315
Messenger RNA biogenesis [BR:
lsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H8L67_07315
Ribosome biogenesis [BR:
lsy03009
]
Prokaryotic type
rRNA helicases
H8L67_07315
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QYR52407
LinkDB
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Position
1509781..1511616
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AA seq
611 aa
AA seq
DB search
MSTETAPPSFTDLGLSEGLLKALSDVGYETPSPIQAATIPPLMAGRDVLGQAQTGTGKTA
AFALPTLSNIDPKINKTQVLVLAPTRELAIQVSEAFHKYAKHLPGFNVVPIYGGQSYTPQ
LNALKRGAHVVVGTPGRVIDHLNKGSLDLSALKALVLDEADEMLRMGFIDDVEEVLKKTP
DGRQVALFSATMPAQIRRIAQTYLREPVEVTIKSTTTTSANINQRYWAVSGVHKLDALTR
ILEAEPFDGMIIFSRTKIGTEELAEKLSARGIAAAAINGDMDQKARERTIQRLKDGNIDV
LVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRKGDAILFVTPREKGMLR
AIERATRQTIEPMALPTVAAVNERRVEKFFEKVTSALESEGAQKLKEMLEQFERERNIPM
SEIAAALAHLVQGKKPLLLDAREEAASAKGFSSDHPERASRKERFGSDGDRPERKPRAPR
NEGPIDDVPMETFRIDVGHAHMVKPGNIVGAIANEAEIDARHIGRVDIRNDYSLVDLPKG
MPDELLTYMKKVRVGGRPIQLRLATDDDINAPSFRPRKGKPEGGFGQREGGYPPRGPKKF
GGGKFGGGKKY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaaaccgcacccccctccttcaccgatctgggtctttccgaaggcctgctc
aaagcattgagcgacgtgggctatgaaaccccgtcgccgattcaggcggcaacgattccg
ccgttgatggcagggcgcgacgtgcttggccaagcgcaaacgggcaccggcaagactgcc
gccttcgcgttgccgaccttgtccaacatcgatccgaaaatcaacaagacccaggtcttg
gtgctggcgccgacgcgcgagctcgccattcaagtcagtgaagccttccacaagtacgcc
aagcatttgcctggtttcaatgtggtgccgatttacggcggccaaagctataccccgcag
ctcaatgcgctcaagcgcggtgcccatgtggtggtgggtaccccgggtcgcgtcatcgac
catctcaacaagggttcgttggatctgtcggccttgaaagcgctggtgctcgacgaagcc
gatgaaatgttgcgcatgggcttcattgacgacgtcgaagaagtgctgaagaagacgccg
gacggccgccaagtggcgctgttctcggcgaccatgccggcgcagatccgtcgcatcgcg
caaacctatttgcgtgagccggtggaagtgaccatcaagtcgaccaccaccacttcagcc
aatatcaaccagcgctattgggcggtgagtggcgtgcacaagttggatgcgctgacccgc
attcttgaagccgaacctttcgacggcatgatcatcttctcgcggaccaagatcggtacc
gaagagttggcggaaaagttgtcggcgcgcggtattgccgcggcggcgatcaatggcgac
atggatcaaaaggcgcgcgagcgcactattcaacgcctgaaagacggcaacattgatgtg
ttggtggccaccgacgtggcggcacgcggtctcgacgtggaacgcatcagccacgtgttg
aactacgacatcccctacgacaccgaaagctatgtgcaccggatcggtcgtaccggtcgt
gccggccgcaagggcgatgcgatcttgttcgtgacgccgcgtgagaaaggcatgttgcgt
gcaatcgaacgcgccacccgccaaaccatcgaaccgatggctttgccgaccgttgccgcg
gtgaacgaacgccgcgtcgaaaaattcttcgagaaagtgacttccgcgttggaatcggaa
ggcgcacaaaaattgaaggaaatgctcgagcagttcgaacgcgaacgcaatattccgatg
tcggaaattgcggccgcgctcgcgcacttggtgcaaggcaagaagcctttgttgttggat
gcccgcgaagaagcggcctcggcgaaaggcttctcgtccgaccatccggaacgcgccagc
cgcaaggaacgcttcggcagcgacggtgatcgcccggaacgcaaaccgcgcgcaccgcgt
aacgaaggcccgatcgacgacgtcccgatggaaaccttccgcatcgatgtcggccacgcc
cacatggtgaagcccggcaacattgtcggcgcgattgccaacgaagcggaaatcgacgca
cgccacatcggccgcgtggacatccgcaacgactattccttggtcgacttgcccaaaggc
atgccggacgaattgctcacgtacatgaagaaagtgcgcgtcggcggccgcccgatccaa
ctccgcctcgccaccgacgacgacatcaacgccccgtccttccgcccccgcaaaggcaag
cccgaaggcggcttcggccaacgcgaaggcggctaccccccgcgcggcccgaagaaattc
ggcggcggcaagttcggcggcggcaaaaaatactga
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