Lysobacter soyae: H8L67_07835
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Entry
H8L67_07835 CDS
T10230
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lsy Lysobacter soyae
Pathway
lsy03030
DNA replication
lsy03430
Mismatch repair
lsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H8L67_07835 (dnaE)
03430 Mismatch repair
H8L67_07835 (dnaE)
03440 Homologous recombination
H8L67_07835 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsy03032
]
H8L67_07835 (dnaE)
03400 DNA repair and recombination proteins [BR:
lsy03400
]
H8L67_07835 (dnaE)
Enzymes [BR:
lsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H8L67_07835 (dnaE)
DNA replication proteins [BR:
lsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H8L67_07835 (dnaE)
DNA repair and recombination proteins [BR:
lsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H8L67_07835 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QYR52499
LinkDB
All DBs
Position
1618684..1622208
Genome browser
AA seq
1174 aa
AA seq
DB search
MSSRFTHLQLHSEYSLMDSVIRLDDLIARARELAMPAVAVTDRNNLFALVKFYGKAEKAG
IKPIAGADVSVKHADGTRSQLTLLCRNRDGYLSLSRLLTRAWMEGHQTEGVAINFDWIAE
EAPRDLFALAGFDSAVGIHALAQKDALAKQETEALLSIFGERLALAVTRAQRENDDPFNA
AAFDLSSSFSVPVVASNDVRFLDASDYEAHEARVCISSSRVLDDPRRPRPYTPEQSFKSP
DEMRALFEDAPDAIDNANAIARACNLELQLGTYFLPAFPVPSEETLETWMRSQAHEGLER
RLEKQPLANGHTRESYIERLDVELGVIANMGFAGYFLIVADFIGWAKKNGIPVGPGRGSG
AGSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVAQKYGRD
RVSQIITYGTMAAKAVVRDTGRVMGFGYGFVDGIAKLIPMTLGVGLEDALGRTEKGKKDA
NFASPELQSRYEKEDGVRDLLDLALKLEDLPRNAGKHAGGVVIAPTPLSDFCPLFAEHAG
EGLGRNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINARIRANEPDAALVDITA
LPLTDTATFELFARGDTVAVFQFESRGMRELLKKAKPDTFEDLIALVSLYRPGPMDLIPD
FIDRKHGIAEVSYPHPLLEPVLAPTYGVVVYQEQVMQTAQILAGYSLGGADLLRRAMGKK
KVEEMAKERAKFEAGAQEVHGIAPAVAGPIFDLLEKFAGYGFNKSHAAAYALVSYQTAWL
KAHYPAEFMAAVLSSDMDKTEKVVGFLNEARAMGLTLLPPDVNASRYMFEAIDPQTVRHG
LGAVKGVGQNACEAIAEARDSGGVFKDVMDFCARVDATRVNRRAIEALIHAGAMDGLGGN
RPTLLLQFPEAMKAQEQEAKAQAVGQDSLFGGMGAAAPPLQVDLPTASDWTLAQRLKAEK
DSLGVYLSGHPVDPYRDSLIAITGHDLSHLESIWNNRSDQERRGWRPEANAILGGMITGL
RRRGETQTIATLEDGRGQVECMVFQEEMEQFGHLLAQDALLIVEGGLREDDFNGGFSLRA
RRVWNFREIHPAYAERILVRLDARDDAAAARFLEALKAYRPGLTPLRIELLRDGVRGAVD
LRAPHGVLPDIELPGILRAIDGVKSVAVSFRKPW
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgcttcacccacctgcaattacacagcgaatactcgctgatggattcggtc
atccgtctggatgatctgattgcacgtgcccgtgaattggcgatgcctgctgtcgcagtg
accgaccgcaacaacctgttcgccttggtcaagttttacggcaaggcggaaaaggccggc
atcaaaccaattgccggcgcggatgtttctgtcaaacatgccgacggcacccgttcccaa
ctgaccttgctgtgccgcaaccgggacggctatttgtctttgtctcgcttgctgacgcgc
gcatggatggagggtcaccagaccgaaggtgtcgccatcaacttcgattggatcgccgag
gaagcgccgcgtgatttgttcgcgctcgccgggtttgattcggccgtcggtattcatgcc
ttggcgcaaaaagatgcgctggcaaagcaggagaccgaagcgctcctgtccattttcggt
gagcggctggcactcgccgtcacgcgcgcacaacgcgagaacgacgacccgttcaacgcg
gcggcgtttgatttgagcagcagcttttctgtgccggtggtggccagcaatgatgtccgt
ttcctcgatgccagtgattacgaggcacacgaggcacgcgtttgcatctcgagcagtcgc
gtgctcgatgacccacgccgaccgcgtccctacacgccggaacagtcattcaaatcgcct
gacgagatgcgcgcgttgtttgaggatgcgcccgacgcgatagacaacgccaacgccatc
gcccgtgcctgcaatctcgagctgcagttgggcacttatttcttgcccgcgtttccggtg
ccctctgaggagacgctcgaaacctggatgcgatcgcaggcgcacgaaggcctcgaacga
cgactggaaaaacagccgctggccaacgggcacacgcgcgaatcctatatcgaacgattg
gacgttgaactcggcgtgattgccaacatgggcttcgccggctacttcctgatcgtggcc
gacttcatcggttgggcgaagaaaaacggtatcccggtcggccctggccgcggttcgggt
gccggttcgctggtggcatgggcgcttggcatcaccgatctcgacccgctgccctatgac
ctgctgttcgaacgcttcctcaatccggaacgcgtgtcgatgcctgacttcgatatcgac
ttctgcatggatcgccgtgacgaagtgatcgattacgtcgcgcaaaaatacggccgcgac
cgcgtgagccaaatcatcacctacggcacgatggccgcgaaggctgtggtgcgcgacacg
ggccgggtgatgggctttggttatggcttcgtggatggcatcgccaagctcattcccatg
accttgggggtcggtctggaggatgcgctcggccgcacggaaaaaggcaaaaaagacgcc
aatttcgccagccccgaattgcaatcgcgctacgaaaaagaagatggcgttcgcgacctg
cttgatctcgccttgaagctggaagatttgcctcgcaatgccggcaagcacgcgggtggt
gtggtgatcgcgccgactccgctgtcggatttttgcccgctctttgcagaacacgccggc
gaaggtctcggtcgcaatccggtgacgcagttcgacaaagatgacgtcgaagccgtcggc
ttggtgaaattcgacttcctcggacttcgcacgctgacgatcattgattgggcggtgaaa
gcgatcaatgcgcgtattcgcgccaacgagcctgacgccgcactggtggacatcaccgcc
ctgccgctcacggataccgcgaccttcgagctgttcgcgcgcggcgacacggttgcggtg
ttccagttcgaatcacgcgggatgcgtgaattgctgaagaaagcgaagccggacaccttc
gaagacttgattgcgttggtgtccttgtatcgacccggcccgatggatctgattccggac
ttcatcgaccgcaagcacgggattgccgaggtcagctatccgcatcccttgctcgaaccg
gtactggcaccgacctacggtgtggttgtgtatcaggaacaggtgatgcaaaccgcgcag
attcttgccggttattcattgggcggcgccgatcttctacgccgcgccatgggcaagaag
aaagtcgaagagatggcgaaggaacgcgccaaattcgaagccggtgctcaggaagtgcac
ggcatcgcccctgcggtcgccggtccgatcttcgacttgctggaaaagttcgccggctac
ggcttcaacaaatcgcacgcggccgcctatgcattggtgtcttaccaaaccgcttggctg
aaagcgcactaccccgccgaattcatggcggccgtgttgtcgtccgacatggacaagacc
gagaaggtggtcggttttctcaacgaggcgcgcgcaatgggtttgacactgttgccgccg
gatgtgaatgcctctcgctacatgtttgaagcgatcgatccgcaaactgtgcgtcatggc
ttgggcgcggtgaagggtgtcggtcaaaacgcctgtgaagccattgccgaagcacgtgac
agcggcggcgtcttcaaggacgtgatggatttttgtgcacgcgtcgatgcgacccgcgtc
aatcgtcgcgcgatcgaagccttgattcacgccggtgcgatggacggcttgggcggcaac
cggccgacgttgttgctgcagttccctgaagccatgaaggcgcaggagcaggaagccaag
gcgcaggcggtcggccaggattccttgttcggcggcatgggcgccgctgcgccgccgttg
caagtggacctgcccaccgccagcgattggacgcttgcgcagcgactcaaggcggaaaag
gacagtctgggcgtatatctttccgggcacccggtggacccctatcgcgacagtctgatc
gccatcaccggacacgacctctcccacctggaaagcatctggaacaatcgcagtgatcag
gaacgccgtggttggcgccctgaggccaacgcgattctcggtggcatgatcaccggtttg
cgccgccgcggcgagacgcagacgattgccacactggaagatggtcgcggccaagtggag
tgcatggtcttccaggaagaaatggagcagtttggccatctgctggcacaagacgccctg
ttgatcgtcgaaggcggcctgcgtgaggatgactttaatggcggcttctctttgcgcgca
cgccgcgtttggaacttccgtgaaatccatccggcctatgccgagcgcatcttggtgcga
ctggatgcccgcgatgacgcggcggcggcccgcttcctcgaggcgctgaaagcttaccgg
ccgggtctgacgcccctgcgtatcgaattgctgcgcgacggtgtccgcggcgcggtggac
ttgcgggcgccccatggtgtgctgccggacatcgagctaccgggcatcttgcgcgccatc
gacggcgtgaagtcggtcgccgtttcgttcagaaagccttggtga
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