Lysobacter soyae: H8L67_08715
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Entry
H8L67_08715 CDS
T10230
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
lsy Lysobacter soyae
Pathway
lsy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H8L67_08715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lsy02022
]
H8L67_08715
02035 Bacterial motility proteins [BR:
lsy02035
]
H8L67_08715
Two-component system [BR:
lsy02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
H8L67_08715
Bacterial motility proteins [BR:
lsy02035
]
Pilus system
Twitching motility proteins
H8L67_08715
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QYR52660
LinkDB
All DBs
Position
1806480..1807889
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AA seq
469 aa
AA seq
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MTEDRCALVVDDERDIRELLVLTLTRMGLRVETAATLSMAKSQLSNAKFDFCLTDMRLPD
GSGLDLLSHIADNYPEMPVAMLTAFGNMEAAVEALKRGAFDFVAKPVDLKVLRNLVQHAL
DLRSERKEAPKSPAPEKRMDGNSPAMEQLRQTIAKVARSQAPVYILGESGAGKELAARSI
HETSPRAEGPFVPVNCGAIPPELMESEFFGHKKGSFTGAHADKQGLFQAANGGSLFLDEV
AELPLAMQVKLLRAIQEKSVRPVGGQVEETVDVRLISATHKDLAALVEEGKFRHDLYYRI
NVIELRVPPLRERVEDLDMLTQTIFGKLAERHSAAVPTLSAEAKAALRDYPFPGNVRELE
NILERAMTLSDGQTIYAEDLNLPKQTVAAPAPSFPVADLEPEAAPALPVTPQNQAPAGTA
ALPEALEELEKRAIEHALLENRYNKTKTAAQLGITFRALRYKLKKLGLD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaccgctgcgccctagttgtcgacgatgaacgcgatatccgagagctcctc
gttctgaccctgacacggatgggcttgcgcgttgaaaccgcggcaacgctcagcatggct
aaaagccagctcagtaacgcgaaattcgacttctgcctgaccgacatgcgcctgcccgac
ggttccggtttggaccttctgtcccatatcgcggacaactatccagagatgccggtggcg
atgctcaccgcatttggcaacatggaagcggcggttgaagccctgaagcgcggtgcgttt
gacttcgtggccaagcctgtggatttgaaggtcctgcgcaatttggtgcagcatgcgctg
gacttgcgatcggaacgcaaagaagccccgaaatccccggcacccgaaaagcgcatggac
ggcaattcgcccgccatggagcaactgcggcaaaccatcgccaaagtggcacgcagccaa
gcaccggtttacatcttgggagaatccggcgccggcaaggaattggccgcacgaagcatt
cacgaaacttctccgcgggcggaaggcccattcgtgccggtgaactgcggcgcgattcca
cccgaactcatggaaagcgaattcttcggccacaagaaaggcagcttcaccggcgcccat
gccgacaagcaagggctgtttcaagccgccaatggcggctcgctgttcttggacgaagtg
gccgaactgccccttgccatgcaggtaaaactgctgcgtgccattcaagagaagtctgtg
cgccccgtgggtggacaggtggaagagacggtggatgtacggctaatttctgccacgcac
aaggacttggccgccttggtcgaagaaggcaaattccgccacgacctttactaccgcatc
aatgtgatcgaacttcgcgtgccgccgttgcgcgagcgcgtggaagacctcgacatgctc
acccaaaccattttcggcaagttggctgagcgccactcggcggccgtaccgacattgagt
gccgaagccaaggcggcccttcgcgactacccgttcccgggcaacgtgcgcgaacttgaa
aatattcttgagcgcgccatgacgctgtccgacggccagacgatctatgccgaagacttg
aatttacccaagcagacggtggcggcgcccgcgccgagcttcccggtagcggaccttgag
ccggaggcagcacccgcattgccggtgacaccgcaaaatcaggcacccgccggcaccgcg
gcgctgcctgaggcactggaagagctggaaaagcgcgccatcgagcacgccctgctggaa
aaccgctacaacaagaccaaaactgccgcacagctgggcattaccttccgggctttgcgc
tacaagctgaagaagctgggtctcgactga
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