Lysobacter soyae: H8L67_08930
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Entry
H8L67_08930 CDS
T10230
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lsy Lysobacter soyae
Pathway
lsy00260
Glycine, serine and threonine metabolism
lsy00460
Cyanoamino acid metabolism
lsy00630
Glyoxylate and dicarboxylate metabolism
lsy00670
One carbon pool by folate
lsy00680
Methane metabolism
lsy01100
Metabolic pathways
lsy01110
Biosynthesis of secondary metabolites
lsy01120
Microbial metabolism in diverse environments
lsy01200
Carbon metabolism
lsy01230
Biosynthesis of amino acids
lsy01240
Biosynthesis of cofactors
lsy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H8L67_08930
09102 Energy metabolism
00680 Methane metabolism
H8L67_08930
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H8L67_08930
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
H8L67_08930
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
H8L67_08930
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
H8L67_08930
Enzymes [BR:
lsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
H8L67_08930
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QYR52695
LinkDB
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Position
complement(1850072..1851325)
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AA seq
417 aa
AA seq
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MFSRDVTIAKFDPDLARAIAGENQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDVAEQLAIDRLKELYDCDYANVQPHSGSQANQAVYFALLSPGDTILGMS
LAHGGHLTHGASVNISGKLFNAVQYGVNDQGLIDYDEVERLAVEHKPKMLVGGFSAYSQV
VDWKRMRDIADKVGAIFFVDMAHVAGLIAAGVYPSPVPHAHVVTSTTHKTLRGPRGGIII
AKNPSEEIAKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALDPAFKAYQTQVVKNAQAMAK
VIISRGYKIVSGGTENHLMLVDMIGKDVSGKEAEEALGRAHITVNKNSVPNDPRKPFVTS
GLRLGTPAVTTRGYLEPDCIALANWICDVLDNPKDENVINGVRENVEKQCKQFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgcgtgatgtgacgattgccaagttcgaccccgacctcgcccgcgccatcgcc
ggtgaaaaccagcgtcaggaggatcacgtcgagctgatcgcatcggaaaactacaccagc
cccgcggtgatggaagcgcagggcagtcagctcaccaacaagtacgcggaaggctatccg
ggcaagcgctactacggcggctgtgaattcgtcgacgtcgccgaacaactggcgatcgat
cgtctcaaggaactttacgattgcgattacgcgaacgtgcaacctcactccggttcgcaa
gccaatcaagcggtgtacttcgcactgctgagccccggcgacaccatcctcggcatgagc
ttggcgcacggcggacacctcacccacggcgccagcgtcaatatcagcggcaagctgttc
aacgcggtgcaatacggcgtcaacgaccaaggcctgatcgactacgacgaggtcgagcgt
ttggcggtcgaacacaaaccgaaaatgttggtgggcggattctcggcctattcgcaagtg
gtggattggaagcgcatgcgtgacatcgccgacaaagtcggtgcgattttcttcgtcgat
atggcgcacgtggcgggcttgatcgccgccggtgtctatccgagcccggtgccgcacgcc
catgtcgtcacttccaccacgcataagaccctgcgcggtccgcgtggcggcatcatcatc
gccaaaaacccgtccgaagagatcgccaaaaagctgcaatcgattgtatttccgggcatc
caaggcggtccgttgatgcacgtcattgccgccaaggctgtggcgttcaaggaagccctc
gatccggctttcaaggcttaccaaacccaagtggtgaagaacgcccaagccatggcgaag
gtgatcatttcgcgcggctacaaaatcgtgtccggcggcacggaaaaccatttgatgttg
gtggacatgatcggtaaagacgtgagcggcaaagaggctgaagaagcactcggtcgcgcg
catatcaccgtcaacaagaattcggtgccgaatgatccgcgcaagccctttgtcacttcg
ggtctgcgtttgggcacgccggccgtcaccacgcgcggctatctggagcccgattgcatt
gcgttggccaactggatctgcgatgtgctcgacaacccgaaagatgagaacgtcatcaac
ggagtgcgtgaaaacgtcgagaagcagtgcaaacaattcccggtctacggctga
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