Lysobacter soyae: H8L67_09650
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Entry
H8L67_09650 CDS
T10230
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lsy Lysobacter soyae
Pathway
lsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H8L67_09650 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsy03019
]
H8L67_09650 (recQ)
03400 DNA repair and recombination proteins [BR:
lsy03400
]
H8L67_09650 (recQ)
Enzymes [BR:
lsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H8L67_09650 (recQ)
Messenger RNA biogenesis [BR:
lsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H8L67_09650 (recQ)
DNA repair and recombination proteins [BR:
lsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H8L67_09650 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYR52822
LinkDB
All DBs
Position
1993012..1994835
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AA seq
607 aa
AA seq
DB search
MKSVQDAANDSALDVLRSVWGYQTFRGRQHAIVNHVAAGLDALVLMPTGGGKSLCYQVPA
LLRPGCAIVVSPLIALMQDQVEALHQLGIEAAYLNSSLPAGEAYAVEQRFVSGDLKLLYV
APERLLTPRFLDLVARAPVSLFAIDEAHCVSQWGHDFRPEYRQLTMLHKRWPSIPRIALT
ATADPATQEEIIERLQLDDAEQFSSSFDRPNIRYTIVEKNDARRQLLDFLDGHAGESGIV
YAMSRKKVEDTAAFLRSKGYNALAYHAGMDTETRALHQRRFLREDGIIMAATIAFGMGID
KPDVRFVAHVDLPKSVEGYYQETGRAGRDGEPAEAWMAYGLGDVVNLRKMIESSEADDSR
KWMERRKLDSLLGYCETLGCRRQRLLASFGEVMANPCGNCDNCLNPPEAWDATEPARMAL
SCVYRCGQRFGASHLIDVLRGERTERILQLGHDTVSTFAIGRDIDSNTWRSIFRQLVSHG
YLETDTHGGLRLAEASRTLLKGEQTLQLRREQARVRRQRRAALSNPNSPDAWMSADARLL
FDALRALRTELARAQSVPPYVIFHDKTLREIATSRPESLSALGTIEGIGPRKLAEYGNQV
LDLISAN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgttcaagacgccgccaacgactccgcgctagatgtgttgcgcagtgtttgg
ggctatcagaccttccgggggcgccagcacgccatcgtcaaccatgtcgccgccggcctc
gatgccttggtgctgatgccgacgggtggcggaaagtcactgtgctatcaagtcccagcc
ctcctgcgtccgggctgcgccatcgtggtctctccgctgattgccttgatgcaggatcag
gtcgaagcgctgcaccagcttggcattgaagcggcgtatttgaattcaagtttgccggcc
ggcgaggcgtatgccgttgagcagcgttttgtgtcgggcgatttgaaactgttgtacgtg
gcacccgaacgcttgttgacgccgcgtttcttggaccttgtcgcgcgcgcgccggtgtct
ttgttcgcgattgacgaagcccattgcgtgtcgcaatgggggcacgatttcaggcccgag
tatcgacagctgacgatgctgcacaaacgttggccgtcaattccacgcatcgcgctgacc
gccaccgccgatcccgccacacaagaggaaatcatcgaacgcttgcaattggatgatgcc
gagcagttctccagcagcttcgaccgacccaacatccgctacaccattgtcgagaaaaac
gatgcacgccggcagttgctcgactttctcgacgggcatgccggtgagtccggcatcgtc
tatgcgatgtcccggaaaaaagtcgaagacacggccgcgtttttgcgaagcaaaggctat
aacgccttggcgtatcacgccggcatggatacggaaacgcgcgcgttacatcagcgccgg
tttttgcgcgaagacggcatcatcatggcggcgaccatcgccttcggaatgggcatcgac
aagccggatgtccgatttgtcgcccacgtggatctgccgaaatcggtcgagggctattac
caagaaaccggtcgtgccggccgcgacggcgaaccagccgaagcgtggatggcctatggc
ttgggtgatgtcgtcaatttgcgcaagatgatcgaaagctccgaagcggatgattcgcgc
aaatggatggagcgtcgcaagctcgacagtctattgggctactgcgaaacgctgggctgc
cgtcgccaacgcttgctggcaagcttcggcgaagtgatggccaatccttgcgggaattgc
gacaactgcctcaatccgccggaagcttgggatgccaccgaacccgcacggatggcactg
agttgtgtctaccgttgcggtcaacgcttcggtgcctcccacctgattgatgtgctgcgg
ggcgaacgtactgaacgcatcctccagttgggtcatgacaccgtcagcaccttcgccatc
ggtcgggatatcgattcgaatacttggcgcagtatttttcgccaattggtatcgcacgga
tatctggagaccgacacacatggcggtctgcggttggcagaggcttcacgtacgctcttg
aagggcgaacaaacgctgcaattgcgccgcgagcaagcgcgagtccgccgtcagcgacgt
gccgcactgtcgaacccgaactcgccggatgcctggatgtccgccgatgcccgcctctta
tttgatgcgctgcgcgcattgagaaccgagttggcgcgcgcccagagtgtgccgccctac
gtgatcttccacgacaagaccctgcgggaaattgccacctcccggcccgaaagcctgtct
gccctagggaccatcgagggcatcggtccgagaaaattggcggaatatggcaatcaggtg
ctcgacctgatttcggcgaattga
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