Lysobacter soyae: H8L67_09950
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Entry
H8L67_09950 CDS
T10230
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsy Lysobacter soyae
Pathway
lsy03420
Nucleotide excision repair
lsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H8L67_09950
03430 Mismatch repair
H8L67_09950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsy03400
]
H8L67_09950
Enzymes [BR:
lsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H8L67_09950
DNA repair and recombination proteins [BR:
lsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H8L67_09950
MMR (mismatch excision repair)
Other MMR factors
H8L67_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
ResIII
DEAD
SidE_mART
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QYR52878
LinkDB
All DBs
Position
2048194..2050467
Genome browser
AA seq
757 aa
AA seq
DB search
MSEKSYTPEQIRVIEHAGRHAVVAAVAGSGKTETLVGRVRHLLREHNPEQIAVVMFNRDA
RESFQNRFEKAARSKPPEIRTFNSMGNKIVKRFVEIGLLPDAQIIDKDYRRTKIAKDVFT
HVFKSLNADDQVPDKDLIDSFLQFILLVKSDVRSAEDVFEAGKYAKAAAGFPQAFHLYEK
ERARAKIRFFEDQIYDPVKLMLRKPQIQSYVSDKVDHLIVDEAQDMNGIQIALLRILAGT
RASVMLVGDEDQAIYDWRGAKPDYLIRGFEADFPDATRYTLPHTFRFGHTLSLAASHLIT
RNANRNAKISVSAEGTPRTRIHCVGLSLGLTGLGEHVQSVLSEGTPPDDVAILVRTYNMS
VSIELELHQLGIPYFVYGRPPLTRIPEISALVGVLQLASGRWKTMSADEVHFIIRNLLQR
PALYLDRVASQQVVEQVMARPESISDAIRSVITEKTQKFHADQIRDRADLLEIIATTTDP
DEKVIDVLNRYLQGTDFEKSIEKQSPTAESAEAILANVAAFKLIATKHEGAIDSFLDEID
PLIDSSQTEPPDHPHVWIGSIHRAKGAQWPVVFVPGLATRVFPRDDLTEEDLEAERRLFY
VASTRSVDTLFLAHPADDNFSSIANDIECKDERAFGSGVSRFLWEMDLAVARHAGEALEN
GGPFIPHEVERPGIANQYFSRHDVSRDWAYRRKPRTHRKPPTGAEGTTSLPAGTRVKHPV
FGTGVVDRWVDAKVVRVNFDSGDSRMLVVSLAGLVKQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaagagctatacaccagagcagattagggttattgagcatgcgggtcgccat
gctgtcgtcgcggccgtagcgggttcggggaaaacagagaccttagtcggtcgagtgcgc
catctactccgcgagcacaaccctgagcaaatcgccgttgtgatgttcaatcgtgatgct
agggagtcgttccagaaccgttttgaaaaagcggcgcgttcaaagcctcccgagattcgt
acgtttaactcgatgggcaataagatcgtcaaacggttcgtagagattggattgcttcca
gacgcacaaattatcgacaaggactaccgccgcactaagattgccaaggacgtcttcacg
cacgtatttaaatcactcaacgctgatgatcaagttcccgataaggatctgatcgattcg
ttccttcagttcattcttctggtcaagtccgacgtacgctcagccgaagatgtcttcgaa
gcaggcaaatacgcgaaggcggcagctggattcccgcaggccttccacctgtacgagaag
gaacgcgcgcgcgcaaaaatcaggtttttcgaagaccagatctatgaccctgtgaaactg
atgctgcgtaagcctcagattcaaagctacgtatccgacaaggtcgatcacctcatagtc
gacgaagcccaagacatgaacgggatccagatcgcgctacttcgaattcttgccggtacg
cgcgccagcgtcatgctcgtaggcgatgaagaccaggcgatttacgactggagaggcgca
aaaccggactatctgattcggggctttgaagccgacttcccagatgccacgcgctacacc
cttccccatacgtttcgattcggccatacgctttcgttggcagccagccatctcattacg
agaaacgcaaacagaaacgcgaagattagtgtctctgctgaaggcactccgagaactcgt
attcactgcgttggtctgtcactgggcctgacggggcttggtgagcacgttcaatccgta
ctctcggaaggaacgcctccagacgatgtcgcgattctcgttcgcacttacaacatgagc
gtttctatcgagctagaactacaccaactcggcattccctacttcgtgtacggccgtccg
ccgcttactcggataccggagatcagcgctttggtgggggtcttacagctagcgagcggc
cgatggaagaccatgagtgctgatgaggtccatttcatcatcagaaatctccttcagagg
ccggccctgtacctcgatcgagtcgcgtcccagcaggtcgtcgaacaggttatggcaagg
ccagagagtatctcggacgccatcagatcggtgattacagaaaagacccagaagtttcac
gctgaccaaatcagggaccgtgccgatttgttggagatcatcgccacgactacggaccca
gatgaaaaggtgattgatgtcctcaatcgttatcttcaggggacggactttgaaaagtcc
atcgagaaacagtcgccaacggccgagtctgcagaggcaatcttggcaaacgttgctgct
ttcaagttgatagcaaccaagcatgaaggggcgattgattcgtttctcgatgaaatcgac
cctttgatcgactcgtcgcaaacggaaccgccagatcacccgcatgtttggattggttca
atccatcgtgccaagggcgcgcaatggccggtggtcttcgtaccggggttggccacccgc
gtattccctcgtgacgatctgactgaagaggatttggaagcagagagacgccttttctac
gtcgcctctactcgctcagttgacacattgttcttagcacatccggcagatgacaatttc
tcgtcaatagccaacgatattgaatgcaaagatgaacgtgcgtttggcagcggcgtgtca
cgtttcctttgggagatggacttagccgtggctcgacatgcgggcgaagcgcttgagaac
ggcggccccttcattccgcatgaagtcgaacgccccggtatcgcaaaccagtatttctct
cgacacgatgtctctcgtgactgggcgtatcgcaggaagcccagaacgcatagaaagccg
cccactggtgcggaaggaacgacctcacttccggccgggacccgcgtcaaacaccctgtt
tttggcacaggtgtcgtggacaggtgggtcgacgcaaaggtggttcgagtgaactttgat
agcggcgactcgagaatgttggtcgtctcgttggcgggactagtcaagcagtaa
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