Leptotrichia shahii: JCM16776_0101
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Entry
JCM16776_0101 CDS
T06589
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lsz
Leptotrichia shahii
Pathway
lsz00521
Streptomycin biosynthesis
lsz00523
Polyketide sugar unit biosynthesis
lsz00541
Biosynthesis of various nucleotide sugars
lsz01100
Metabolic pathways
lsz01110
Biosynthesis of secondary metabolites
lsz01250
Biosynthesis of nucleotide sugars
Module
lsz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JCM16776_0101 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JCM16776_0101 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JCM16776_0101 (rfbC)
Enzymes [BR:
lsz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JCM16776_0101 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Tospo_nucleocap
Motif
Other DBs
NCBI-ProteinID:
BBM39902
UniProt:
A0A510JKR7
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Position
complement(109780..110349)
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AA seq
189 aa
AA seq
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MNNFTIKETPIKDLVIIEPKVFGDERGFFLETYNQKSFEELGLTMNFVQDNHSKSKKGVL
RGLHFQTKHTQGKLVRVIKGSVYDVAVDLRKGSETFGKWYAVKLSSKNKLIFYIPEGFAH
GFLTLEDETEFTYKCTDLYSPEYDSGILWSDEIIGIDWKFEEFGINPNELTISEKDKVQQ
KFDKNKNYF
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattttactataaaggaaaccccaataaaagacttggtaataatcgagccaaaa
gtttttggagatgaaagaggattttttttagaaacttataatcaaaaatcctttgaagaa
ttaggacttacaatgaacttcgtccaagacaaccattcaaaatctaaaaaaggcgtttta
cgtggacttcacttccagacaaagcacactcaaggaaaattagttcgtgtaataaaggga
agtgtctacgatgtagcagttgatttaagaaagggcagtgaaacttttggaaaatggtac
gcagtaaaattatcttctaaaaataagctgatattttacatccccgaaggctttgcacat
ggttttttaacactagaagatgaaacagagttcacttataaatgcacagatttatattct
cctgagtatgatagcggaattttatggagtgatgaaataataggtattgactggaaattt
gaagaatttggaataaatcccaatgaattgacaatttctgaaaaagataaagttcaacaa
aaatttgataaaaataaaaattatttttaa
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