Leptotrichia shahii: JCM16776_0645
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Entry
JCM16776_0645 CDS
T06589
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lsz
Leptotrichia shahii
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsz03016
]
JCM16776_0645
Enzymes [BR:
lsz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JCM16776_0645
Transfer RNA biogenesis [BR:
lsz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JCM16776_0645
Prokaryotic type
JCM16776_0645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BBM40425
UniProt:
A0A510JPX4
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All DBs
Position
716258..717334
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AA seq
358 aa
AA seq
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MEKNFTKDGLILLNKSKGISSFAAINELKRKIKAKKVGHAGTLDPMAEGLMIVMINDATK
FSDDLMKKEKEYYVEMELGYKTDTYDLEGTIIERYEAEINISNAQIIKAVNSFKGKIKQI
PPMYSAVKVDGKKLYDLARKGVEVERTERNVQISEVRKIKIVRPNKNSKDNENIKISFYV
KVSSGTYIRSLVYDIGEKLGVFATMTRLVRTKIGRFEIEDAINLEKAEAEIDKLKELVEA
KRENESFWATKSEAVIRAEKIREIVCFVEIEYVLDYFGINVSNEKYGKLKNGMTVIDTFK
KFENISKEVNMRKNIKENQKFKIYVRNRDTNEREFRGIVKIVNIKGDRIYLKRDKYFL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatttcacaaaggacggacttattctactgaataaaagtaaaggaataagc
tcgtttgcggcaattaatgagctaaaaagaaaaatcaaggctaaaaaagttgggcatgcg
gggacattagatccgatggctgaagggcttatgattgttatgattaatgatgctacaaaa
ttttctgatgacctgatgaaaaaggaaaaggaatattatgttgaaatggaacttggatac
aaaactgatacttatgatctggaagggacgattattgaaagatatgaagctgaaataaat
ataagcaatgcccaaataataaaagctgtaaatagttttaaaggaaaaataaaacaaatc
cctccaatgtattctgcagtaaaagtagatgggaaaaaactttatgatttggcgagaaaa
ggtgtggaagttgaaagaacagaaagaaatgttcaaatttcagaagttagaaaaataaaa
attgttcgaccgaataaaaattcaaaagataatgaaaatattaaaatttcattttatgta
aaagtcagcagtggaacttatatccgttctctagtttacgatattggggaaaaattggga
gtttttgctacaatgacaaggcttgtgagaactaaaattggaagatttgaaattgaagat
gcgattaatttggaaaaggctgaagctgaaattgataaattgaaggaattagtggaagct
aaaagggaaaatgaatcgttttgggctacaaaaagtgaggctgtaatcagagctgaaaaa
attcgggaaatagtgtgttttgtggaaatagaatatgtgcttgactattttgggataaat
gtttccaatgagaaatatggaaaattgaaaaatggaatgacagttattgacacatttaaa
aaatttgaaaatataagtaaagaagttaatatgagaaaaaacattaaagaaaatcagaaa
tttaagatttatgtgagaaatagagatacaaatgaacgggaatttcgtggaattgtaaaa
attgtaaatattaagggagataggatttatttaaaaagagataaatattttttgtaa
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