Leptotrichia shahii: JCM16776_0664
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Entry
JCM16776_0664 CDS
T06589
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lsz
Leptotrichia shahii
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsz03032
]
JCM16776_0664
03036 Chromosome and associated proteins [BR:
lsz03036
]
JCM16776_0664
03400 DNA repair and recombination proteins [BR:
lsz03400
]
JCM16776_0664
DNA replication proteins [BR:
lsz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JCM16776_0664
Chromosome and associated proteins [BR:
lsz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JCM16776_0664
DNA repair and recombination proteins [BR:
lsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JCM16776_0664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Trp_ring
Motif
Other DBs
NCBI-ProteinID:
BBM40444
UniProt:
A0A510JMF7
LinkDB
All DBs
Position
734950..735231
Genome browser
AA seq
93 aa
AA seq
DB search
MSKKEFVDAYAKATGETKKRAEELVNQFLDTVEKTLLNGNSVQFVGWGTFEVKERAARTG
INPQTKEEIQIPAKKVVKFKVGKKLADNVVEGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaagaatttgtagatgcttatgcaaaagctacaggagaaactaaaaaaaga
gcagaagaattggtaaatcaatttttagatactgtggaaaaaacgttattaaatggaaat
tcagttcaatttgttggttggggaacatttgaagtaaaagaaagagcggcaagaactgga
attaatccacaaactaaagaagaaattcaaatacctgcaaaaaaggttgttaaatttaaa
gttggtaaaaaattagctgataatgtagttgaaggaaaataa
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