Leptotrichia shahii: JCM16776_0875
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Entry
JCM16776_0875 CDS
T06589
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lsz
Leptotrichia shahii
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsz03400
]
JCM16776_0875
DNA repair and recombination proteins [BR:
lsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JCM16776_0875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
AAA_24
nSTAND3
AAA_14
ABC_tran
GvpD_P-loop
AAA_16
FeoB_N
AAA_22
SLFN-g3_helicase
NTPase_1
AAA_18
AAA_19
AAA
KdpD
TK
Elong_Iki1
MMR_HSR1
KTI12
NACHT
CobU
ATPase_2
AAA_28
AAA_5
MeaB
AAA_30
RsgA_GTPase
AAA_33
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
BBM40655
UniProt:
A0A510JQL0
LinkDB
All DBs
Position
933304..934662
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AA seq
452 aa
AA seq
DB search
MAAKKGKSKYICSECGYSSLKWLGKCPNCDAWGTFEEEIDIKRTFKDVESQDVSISKITE
IEIEKEFRMVTPFEEFDRVLGGGLIKGEVVLITGSPGIGKSTFLLQLSQEYAKIGNVFYV
SGEESPRQIKQRAERVNVKSENLYILNDTNIEKIESVILKDKPKVVVVDSIQTLYSENVN
SIPGSVTQIRETTLKIIEIAKKNEIAFYIVGHVTKDGKLAGPKLLEHMVDAVLQIEGEEN
SYYRIIRSIKNRYGSTNEISIFDMKENGISEVKNPSEFFISDRDEKNIGSIIVPIFEGSR
VFLFEVQSLLGTPNFGMPRRTVEGYDKTRVEILSAVLSRSLEVDVNSKDIYINIPGGIDL
NDRSSDLAVIFSLLSSVKGVPISQKIAAIGELGLRGEVRKVSFIKNRVNELEKMGFAGVY
LPKSHQADFEKEKTKIKLNYISNISELVERIR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaaaagggaaaatctaaatatatatgttcagaatgcggttacagttcgtta
aaatggctgggaaaatgtccaaattgtgatgcttggggaacatttgaagaggaaattgat
ataaaaagaacctttaaggatgtggaatcacaagatgtttcaattagcaaaataacagag
attgaaatagaaaaggaatttcggatggtaacgccttttgaggaatttgacagagtgctg
ggaggcggtctgataaagggagaagttgtgcttattacaggaagtcctggaattggaaaa
tcaacttttctgcttcagctgtcgcaggaatatgcgaagattggaaatgtattttatgtt
tctggggaagaatcgccacggcaaataaaacagcgtgcagaacgtgtcaatgtaaaaagt
gaaaatttgtatattttaaatgatacaaatattgaaaaaattgaaagtgtaattttaaag
gataagccaaaagttgttgtagttgactcaattcagacactttattctgaaaatgtgaat
tccattcccggaagcgtaacacaaattcgggaaacaactttaaaaatcattgaaattgct
aaaaaaaatgaaatcgcattttatattgtcggacatgttacaaaagatggaaaattggca
gggccgaaattgctggaacatatggttgacgcagttttgcaaattgaaggtgaagaaaat
agctattacaggattatccgctcgataaagaaccgttatggctctacaaatgaaatttca
atttttgatatgaaggaaaatggaattagtgaagtgaaaaatccgtctgaatttttcata
agtgatagagatgaaaaaaatattggaagtattattgtgccaatttttgaaggaagtcgt
gtatttttatttgaagtgcagtcgttattgggaacaccgaattttggaatgccgagaaga
acggtggagggatatgataaaactcgtgtggaaatattaagtgctgttttgtcacgttct
ttagaagtagatgtaaattcaaaggatatttatataaatattccgggaggaattgactta
aatgacaggagttctgatttagcagtaattttttcacttttatcttcagtaaaaggtgtg
ccgataagtcagaaaatagcagctattggcgaattgggattacgaggagaagtgagaaaa
gtgtcctttatcaaaaatagggtaaatgagctggaaaaaatgggatttgcaggggtatac
cttccaaaaagccatcaggctgattttgagaaagaaaaaacaaaaataaaactgaattat
ataagtaatataagtgaacttgtcgagaggataagataa
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