Leptotrichia shahii: JCM16776_0900
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Entry
JCM16776_0900 CDS
T06589
Name
(GenBank) RNA polymerase sigma-32 subunit RpoH
KO
K03086
RNA polymerase primary sigma factor
Organism
lsz
Leptotrichia shahii
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JCM16776_0900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsz03021
]
JCM16776_0900
Transcription machinery [BR:
lsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JCM16776_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_28
HTH_10
KORA
DUF1118
Motif
Other DBs
NCBI-ProteinID:
BBM40680
UniProt:
A0A510JMX0
LinkDB
All DBs
Position
959633..960454
Genome browser
AA seq
273 aa
AA seq
DB search
MEDNNLNLMSLYLSDIQKFDLLSKEEEYELLKRIRKDNDEQARQLLILSNLRLVISTAKK
SLGNGLPLIDLISEGNIGLIKAINKFDYEKGHRFSTYAVWWIKQSIKKAIINIGRDIRIP
SYKYEQLSKVNKVIKDYNAIHGEAPSTEYIAKEVDLKESKVILLLGEFQDIMSLNETIGD
NIYLEDIIGKNDDVEDKIIKEDQLIEMKELLEKVLNERERLILEYRYGLYDNKIHTLKEI
GEQMGITRERVRQIEKKAITKLKGHLEEYKDIL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggaagataacaacttaaacttaatgtcgttatatctaagtgatattcaaaaatttgat
ttactttcaaaggaagaagaatacgaactgctaaagcgaattaggaaagataatgacgaa
caggcaagacagttactgattttatcaaatttaagactggtaataagtacagctaaaaaa
tctcttggaaatggattgcctctaattgatttaattagcgaagggaatattggattgata
aaggctataaataaatttgactatgagaagggtcatagatttagcacatatgcagtatgg
tggataaaacagtcaattaaaaaggcaattatcaatattggaagggatattagaatacca
tcttataaatatgagcaattatcaaaagtaaataaagtcataaaagattataatgccatt
cacggtgaagctccatcaacagaatatattgcaaaggaagttgatttaaaggaaagcaag
gttatattgcttttaggtgaatttcaggatataatgtcattaaatgaaacaataggcgat
aatatttatctggaggatattattgggaaaaatgatgatgttgaagataagataataaaa
gaggatcagcttattgaaatgaaggaattgcttgaaaaggttttaaatgagcgtgaaagg
ttaattctcgaatatcgttatggattatatgacaataaaatccatacattaaaggaaata
ggcgaacaaatggggattacacgtgaaagagttaggcaaattgagaaaaaagctataaca
aaattaaagggacatttggaagaatataaggatatattatag
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