Leptotrichia shahii: JCM16776_1093
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Entry
JCM16776_1093 CDS
T06589
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsz
Leptotrichia shahii
Pathway
lsz03420
Nucleotide excision repair
lsz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JCM16776_1093
03430 Mismatch repair
JCM16776_1093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsz03400
]
JCM16776_1093
Enzymes [BR:
lsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCM16776_1093
DNA repair and recombination proteins [BR:
lsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JCM16776_1093
MMR (mismatch excision repair)
Other MMR factors
JCM16776_1093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BBM40873
UniProt:
A0A510JTJ3
LinkDB
All DBs
Position
complement(1156899..1159109)
Genome browser
AA seq
736 aa
AA seq
DB search
MSSILDELNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTF
TNKAAREMKERAAALIGHEANNLVVSTFHSFSVRLLKTYSERIGYGRNFNIYDVDDQKSI
ITKIKKDMGIKDNDNVQPGKLANRISKLKEQGIGIKELEREIDMRIPANRLFGEIYQKYD
EVLKANNAMDFSDLLLNARKLLDDAFVLERIQERYQYIVVDEYQDTNDIQYEMINMIAAK
YRNICVVGDEDQSIYAFRGANINNILNFERDYKEAFTVKLERNYRSTKKILDTANELIKN
NKSSKGKTLWTDGSDGEKIKIYNAMTVYDEADFIVTEMKKKKRDGADYKDMTILYRTNAQ
SRVLEEKLLSANIPYKIYGGMQFFQRKEIKDILAYLSLLNNKNDNHNFYRIINVPKRSVG
EKTLEKIQEVANEKNISMLEALHYIDEIPVRASTKLALKEFYNLMQGIYSSLEEMSIKEI
FDEILIRTRYIDSIEDNKEDRVRNIEELLNSITEIEKQNPSMSLNEYLDMISLSSTTDEM
EEDENYVKLMTIHSSKGLEFDYVFLAGMEDGLFPSISFDAPEEELEEERRLCYVAITRAK
KELFISYSSSRKIWGKDDNLRRPSRFIYEMKQDNLEYIGGKYGSLKGKSSAPRSFTPKIE
NFNPFSKDKLGTFGKKLSNSQITSNVNSKYKVGDVVNHKKFGRGKIKKVDMKSMIVEFMI
GEKKIALVLADKILEK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtattttagatgaattaaatgaagagcagagaaaagctgcggaaaaaatagaa
gggcctgtattgatactggctggagcgggaagtggtaaaacacggacagttacttataga
attgcacacatggtaaaagaaatagggatttcaccgcttaatattctggcacttactttt
acgaataaggcggcaagagagatgaaggaaagggctgcggcacttattggacatgaggcg
aataatcttgtagtttctacatttcactcgttttcagtaagattgcttaaaacttattct
gaaagaattggatatgggcgaaattttaatatttatgatgtggatgatcagaagtcgatt
attacaaagataaaaaaggatatgggaattaaggataatgacaatgttcagccgggaaaa
cttgcaaatagaatcagcaaattgaaggaacaggggataggaattaaggagcttgaacgt
gaaattgatatgagaattcctgcgaacaggctttttggcgagatttatcagaagtatgat
gaagttttgaaggcaaataatgcgatggatttttcggatttgcttttgaatgcgagaaaa
ttgctggatgatgcttttgttctcgaaagaatccaggaaaggtatcagtatattgtggtg
gatgagtatcaggatactaacgatattcagtatgagatgattaatatgattgcagcaaag
tatcgaaacatctgtgttgtaggagatgaggatcagagtatttatgcatttcgtggggca
aatattaataacattctgaattttgagagagattacaaggaagcgtttacggtaaaattg
gaaagaaattaccgttctacaaagaaaatactggatacagccaatgagcttattaaaaat
aataaaagttcaaaagggaaaactctttggacagatggctcagatggagaaaaaatcaag
atttacaatgcaatgactgtttatgatgaagcagatttcattgtgacagagatgaaaaaa
aagaaaagagatggtgctgattacaaggatatgacgattttgtacaggacaaatgcacag
tcaagagttctggaggaaaaactgctgtctgcaaatattccttacaaaatttacggtggg
atgcagttctttcaacgtaaggaaataaaggatattttggcatatttaagccttttaaat
aataaaaatgataatcataatttttatcgtataattaacgttccaaaacgttctgttgga
gaaaagacgcttgaaaaaatacaggaagtggcaaatgaaaaaaatatctcgatgcttgaa
gcgcttcactacattgatgaaattcctgtaagagcatctacaaaactggcattaaaggaa
ttttacaatttaatgcagggtatttactcaagccttgaagaaatgtcaattaaggaaata
tttgatgaaattcttataagaacacgttatattgactcaattgaagacaacaaggaagac
agggttagaaatattgaggaattgttaaacagtattactgaaattgaaaagcaaaatcca
agtatgtccttaaatgaatatcttgatatgatttcgttaagttcgacgactgatgaaatg
gaagaagatgaaaattatgtaaaacttatgacaattcacagttcaaaaggactggaattt
gattatgtatttcttgcaggaatggaagatgggctgtttccgtcaatttctttcgatgct
cctgaagaagagctggaagaagagcgtagactttgctatgtggcgataacccgtgctaaa
aaagaactgtttatttcctattcttcatcaagaaaaatttggggaaaagatgacaattta
cgtcgtccatcaagatttatctatgaaatgaagcaagataatctggagtatataggcgga
aaatacggaagtttaaaagggaaatcttcagctccaagaagttttacaccgaaaatagaa
aactttaatccattttctaaggataaattaggaacttttggtaaaaaattaagtaattct
caaataacttcaaatgtgaattctaaatataaagttggagatgttgttaatcacaagaaa
tttggacgtggaaaaataaaaaaagtggatatgaaaagtatgattgtggaatttatgatt
ggtgagaagaaaatagcattggtgttggcggataaaattttggaaaaataa
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