Leptotrichia shahii: JCM16776_1209
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Entry
JCM16776_1209 CDS
T06589
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lsz
Leptotrichia shahii
Pathway
lsz00220
Arginine biosynthesis
lsz00240
Pyrimidine metabolism
lsz00250
Alanine, aspartate and glutamate metabolism
lsz01100
Metabolic pathways
lsz01110
Biosynthesis of secondary metabolites
lsz01240
Biosynthesis of cofactors
Module
lsz_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JCM16776_1209 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JCM16776_1209 (carB)
00220 Arginine biosynthesis
JCM16776_1209 (carB)
Enzymes [BR:
lsz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JCM16776_1209 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp
ATPgrasp_Ter
GARS_A
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BBM40989
UniProt:
A0A510JNR5
LinkDB
All DBs
Position
complement(1283924..1287109)
Genome browser
AA seq
1061 aa
AA seq
DB search
MPKRKDIETILVIGSGPIIIGQAAEFDYAGTQACLSLREEGYKVILVNSNPATIMTDKEI
ADKVYIEPLTVEFVSKIIRKERPDALLPTLGGQVGLNLAVELHESGVLRECGVELLGTKL
ESIKQAEDRELFRDLMNELGEPVPESDIIHNLEEARRFVEKIGYPVIVRPAFTMGGTGGG
ICHNDEELEDIVTNGLRYSPVTQCLLEKSIAGYKEIEYEVMRDSNDTAIVVCNMENIDPV
GIHTGDSIVVAPSQTLTDREYHMLRDVSLKIIRALKIEGGCNVQLALDPYSFNYYIIEVN
PRVSRSSALASKATGYPIAKIAAKIAVGLTLDEIINPVTKNSYACFEPALDYVVSKIPRF
PFDKFEKADRHLGTQMKATGEVMAIGRTYEESLLKAIRSLEYGVHHLGLPNGDEFNSEYI
LKRIHKAGDERLFFIGEALRRGVTPQQIHEMTKIDMFFLDKMKNIIDIEVELKANVNNPD
VLLFAKRYGFSDKVIAHRWNTTEDEVYKLREKYNIKPVFKMVDTCAAEFKSETPYFYSTY
EQENESVIGDKKKIVVLGSGPIRIGQGVEFDYATVHAVKAIKESGYEAIIINNNPETVST
DFSISDKLYFEPLTEEDVMAIIELEHPEGVVVQFGGQTAINLAEKLSKHGVKILGTSLEE
IDNAENRDKFEALLHKLNIPQPLGKTAFDTETAVKNAAEIGYPVLVRPSYVLGGRAMEIV
YREEELRQYMENAVKVSPDHPVLTDRYLVGKEIEVDAICDGETVVIPGIMEHIERAGVHS
GDSIAVYPPQNVSEAHKRTLIDYTVRLAKGLNIIGLLNIQYVISDGEVYVLEVNPRSSRT
VPFLSKITGVPMANLAMKGILGESLKSKGYETGLIEESKNVYTKVPVFSFQKLKDVDTTL
GPEMKSTGEVMGSDENLEKSLYKGLVSAGIKVKDQGSVLFTISGTAKEEAYGLAKRFSDL
GYHIMATKGTAKYFEDKGLRVETVGKIEEEGIYEHDVLGLIYKGLVDMVINTAAKKKTAR
NDGFKIRRAASEQEIACLTSLDTTDALLKVLESISFNVSSI
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgaaaagatatagaaacgattttagtaataggatcaggtccaataattata
ggacaggctgctgaatttgactatgcggggacacaggcttgtctttcattgcgtgaagaa
ggatataaagttatccttgtaaattccaatcctgcaactattatgacagataaggaaatt
gcagataaagtttatattgagccgttgactgttgaatttgtgtcaaaaattataagaaaa
gaacggccagatgcattgcttccgactcttggagggcaagttgggctgaatttggctgtg
gaattgcatgagtctggtgttttaagagaatgtggagtagaacttctagggactaaactt
gaatctataaagcaagctgaagacagggaattatttagagatttgatgaatgagctggga
gaacctgtgcctgaatctgatattattcataatttggaagaagcacgtagatttgtggaa
aaaattggttatccagtaattgtaaggcctgcatttacaatgggtggaactggtggtgga
atttgccataatgatgaagaattggaagacattgttacaaatggacttagatattcgcca
gtaactcaatgtttattggaaaaatcaattgcaggatataaggaaattgaatatgaagta
atgcgtgacagcaatgatacggcaattgttgtctgcaacatggaaaatattgatccagtt
ggaattcatactggagattcgattgtagttgcaccgtcgcaaacattgacagacagggaa
tatcacatgttgagagatgtttcactaaaaataataagagcattgaagattgaaggtgga
tgtaacgttcaattggcattagacccatattcattcaattattatattattgaggtaaat
ccgagagtatcacgttcatcggctcttgcttcaaaggcgacaggttatccgattgcaaaa
atcgctgcaaaaattgcggtcggacttacgcttgacgaaattataaatcctgttacgaaa
aattcttatgcctgctttgagcctgcacttgattatgttgtaagtaaaataccaagattc
ccatttgataaatttgaaaaggcggatagacatttaggaacacagatgaaggctactggg
gaagtaatggcaattggtagaacttatgaggaaagtttgttaaaggctattcgttcactt
gagtatggagttcatcatttagggcttccaaatggggatgaatttaattcggaatatatt
ttaaagagaatccataaggctggagatgaaagactgttctttattggagaagcgttaaga
cgtggagttactccgcagcagatacatgaaatgacaaaaattgatatgtttttccttgat
aaaatgaaaaatattattgatattgaagtggaattaaaggcaaatgtgaataatccagat
gtacttctttttgctaagagatatggattttcagataaagttattgcacatcgttggaat
acgacagaagatgaagtttataaacttcgtgaaaaatacaatattaagcctgtatttaag
atggttgatacctgtgcggctgaatttaagtcagaaacaccttatttttactcaacttat
gagcaggaaaatgaaagcgtcataggagacaagaaaaaaattgtcgtgcttggttcagga
cctattagaattggacaaggagttgaatttgactatgcgacagttcatgcggtaaaggct
ataaaagagtctggttacgaggcaattattataaataacaatccagaaactgtttctaca
gatttttcgatttcagataagctttactttgagccgcttacagaagaagatgttatggcg
ataatcgaacttgaacatccagaaggggttgtcgttcaattcggtggacaaactgcgatt
aacttggctgaaaaattgtcaaaacacggtgtaaaaatattgggaacatcacttgaggaa
attgataatgcggaaaaccgtgataaatttgaagcattattacataagttaaatattcct
caaccattaggaaaaactgcgtttgatacagaaacagctgtaaaaaatgcggcagaaatt
ggctatccagttttagtccgtccatcttatgtattaggtggaagagcaatggaaatcgta
tatcgtgaagaagaacttagacaatacatggaaaatgcagtaaaagtatcacctgatcat
ccagtattgactgacagatatttagttggaaaggaaatcgaagtggatgcgatttgcgat
ggggaaacagttgtaattccaggaattatggagcatattgaaagagcaggagttcattct
ggggattccattgccgtttatcctccacaaaatgtttctgaagcacataagcgtacattg
attgactacacagttagacttgcaaaagggcttaatattattggtcttttaaatattcaa
tatgtaattagtgacggagaagtttatgtactggaagtaaatccgagaagttcgagaaca
gttccatttttgagtaaaatcacaggagttccaatggcaaatctcgcaatgaagggaatt
cttggagaatcattgaagagcaaaggatatgaaactggattaattgaagaaagtaaaaat
gtatatacaaaagttcctgtattcagtttccaaaaattaaaagacgttgatacaacatta
gggcctgaaatgaaatcgactggagaagttatgggaagtgatgaaaaccttgaaaaatca
ctttacaaaggacttgtttcagctggaataaaagttaaggatcaaggaagcgtcttattt
acaattagtggaactgccaaagaggaggcttatggattagccaagagattttctgattta
ggataccatataatggctactaaaggaactgccaaatattttgaagataaaggtctacgt
gtggaaactgttggaaaaatcgaagaggaaggaatatatgaacatgatgtgctaggactg
atttataaaggacttgttgatatggtaataaatacagcggctaaaaagaaaactgccaga
aatgacggatttaagattagacgtgctgcaagtgaacaggaaatcgcttgtcttacttca
cttgatacaacagatgctttactaaaagttctggagtctatttcatttaatgtaagttca
atatag
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