Leptotrichia shahii: JCM16776_2001
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Entry
JCM16776_2001 CDS
T06589
Name
(GenBank) DNA gyrase subunit alpha
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lsz
Leptotrichia shahii
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsz03032
]
JCM16776_2001
03400 DNA repair and recombination proteins [BR:
lsz03400
]
JCM16776_2001
Enzymes [BR:
lsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JCM16776_2001
DNA replication proteins [BR:
lsz03032
]
Prokaryotic type
DNA Topoisomerases
JCM16776_2001
DNA repair and recombination proteins [BR:
lsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JCM16776_2001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBM41749
UniProt:
A0A510JQV2
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All DBs
Position
complement(2133852..2136413)
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AA seq
853 aa
AA seq
DB search
MSDDFRDDNEREEITEMDENDDREIIVEGLPKATDLSNESNVYIEDEIKAAYLDYSMSVI
VSRALPDVRDGLKPVHRRILFSMSEMGMSHKTPFKKSARIVGDVLGKYHPHGDSSVYGAM
VRMAQDFNMRYELIDGHGNFGSIDGDEAAAMRYTEARMAKITEELLADIGKDTIDYRKNF
DESLDEPAVLPAKLPNLLLNGANGIAVGMATNIPPHNLGEVVDGIVALIDNPEISIDELI
TYIKGPDFPTGGIINGKQGIYDAYKTGRGKLRVAGRVEIETSKTGKESIIVTELPYQVNK
SRLIEKIADLVRQKKITGISDLRDETDRDGIRIVIELKKGEESELILNSLYKFTDLQNTF
GVIMLALVDNAPRVLNLKQVLQKYLEHRFEVITRRTEFELKKAKNRAHILEGFKIALDNI
EEVIRIIRASKDANAARAELITKFEFSEIQAKAILDMRLQRLTGLERDKINQEYSELMLL
IEKLMGILSDDSKIYGIIKEEALKLKEDFGDERRTEIRNARAEISIEDLIKDEEVVVTLT
EKGYVKRVAIDTYRSQKRGGIGVNATNTVEDDVVKDMYIARALDTLLIFTTKGKVFSIKV
YEIPETGKQARGKLIGNIINLDSDEKVSTIIKVREFEDNKNLFFVTRNGVVKKSELTLFN
NIMKAGKRAIRLNDEDEVMFVGLTSGSGEDEIFVATRNGIAIRFSEKDVRSMGTTAVGVR
GITLRDKDKIVGAAIINSKMDNDQIRILTITEEGYGKRTKLLEYRLTSRGGKGIINAKLN
DKTGKIVDVKIVRENDEIMLITSEGTLIRTSINEITVQSRSATGVRIMKVRNNEKIASVV
KITEAPDFSEEDK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgattttagagatgacaatgaaagagaagagataacagaaatggatgaaaat
gatgatagggaaatcattgtggaaggattacctaaggctacggatttatcaaatgaatct
aatgtttatattgaggatgagataaaggcggcttatttggattattcgatgagtgtaatt
gttagccgtgcgttgcctgatgtgcgtgatggattaaagcctgtgcatagaagaattttg
ttttccatgagtgagatgggaatgagccataagactccatttaagaaatcggcaagaatt
gtcggggatgtactggggaaataccatccgcatggggattcttcggtttatggtgctatg
gttagaatggcacaggactttaatatgagatatgaacttattgatggacatggaaacttt
ggttcgattgatggggatgaagcagcggcaatgcggtatacggaggctagaatggccaaa
attactgaagagctgcttgcggatattggaaaggatacgattgattacagaaagaacttt
gatgaaagtttggatgagccagctgtactgcctgctaaactgcctaatttattactaaat
ggagcaaacggaattgcagttggaatggctacaaatattccgccacataatttaggggaa
gtagttgatggaattgttgcattaattgataatcctgaaatttcaattgatgaattgatt
acttatataaaaggaccagattttccaactggtggtataattaacggaaaacagggaatt
tacgatgcctataaaactggacgtggaaagttaagagttgcaggacgtgtagaaattgaa
acttctaaaacagggaaagaatcgattattgtaacagaattgccatatcaagtgaataag
tctagacttattgaaaaaattgctgatttagtaaggcagaagaaaattacaggaatatct
gacttgcgggatgaaactgacagggatggtattagaattgtaattgaactgaaaaaaggc
gaagaaagtgaattgatcttaaacagtctttacaaatttaccgatttgcaaaatacattt
ggtgtgattatgcttgcacttgttgacaatgcaccgagagtattaaatttaaagcaggtt
cttcagaaatatctggaacatagatttgaagtaattacaagaagaactgaatttgaattg
aaaaaggctaaaaatagggctcatattttggaaggattcaaaatagcacttgataacatt
gaggaagtaattaggattatacgtgcttccaaagatgcaaatgctgcacgggctgaatta
attactaaatttgaattttcagaaattcaggcaaaagctatattggatatgagattacaa
agacttactggacttgaaagagataagattaatcaggaatatagtgaacttatgctatta
attgaaaaattaatgggaattttatctgatgattcaaaaatatatggtataattaaagag
gaggcacttaaattaaaagaagattttggtgatgaacgtagaactgaaattagaaatgcg
agagctgaaattagcatagaagacttgatcaaggatgaggaagtagttgtaacacttact
gaaaaaggctatgtaaaacgtgtggcaattgacacttatcgttcacaaaaacgtggtgga
attggggtaaatgctacaaatacagtagaagatgatgttgtaaaagatatgtatatagca
agagcacttgacacattgcttatttttacaacgaaaggaaaagtattcagcataaaagtg
tacgaaatacctgaaactggaaaacaggcacgtggaaaactgattggaaatataataaat
ctagattctgatgagaaagtcagcacgataataaaagttcgtgaatttgaagacaataaa
aacttgttctttgtaacacggaacggagttgttaaaaaatctgaattgacattatttaat
aatattatgaaggctggaaaacgtgcaatcagattgaatgatgaagatgaggttatgttt
gttggacttactagcggaagtggtgaagatgaaatttttgtagcgactagaaacggtatt
gccattagattttcagaaaaagatgtaagaagtatgggaacaacagcagttggagtaagg
ggaataacgctacgggataaggataaaatagtaggagctgcaattattaattcaaaaatg
gataatgaccaaattagaattcttacaatcactgaagaaggatatggaaaacgtacaaaa
ttattagaatatagactaacttcccgtggaggaaaaggaattattaatgcaaaacttaat
gataaaactggaaaaattgtagatgtaaaaatcgtaagggaaaatgatgaaattatgctt
attacttcagaaggtacattaattaggacaagtattaatgaaattactgtgcaaagccgt
tcggcaacaggtgttagaataatgaaagtcagaaataatgaaaaaattgcatctgtcgta
aaaattacagaagctcctgactttagtgaagaagataaatag
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