Lactobacillus taiwanensis: H1A07_01435
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Entry
H1A07_01435 CDS
T07177
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lta
Lactobacillus taiwanensis
Pathway
lta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1A07_01435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lta03019
]
H1A07_01435
03009 Ribosome biogenesis [BR:
lta03009
]
H1A07_01435
Enzymes [BR:
lta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H1A07_01435
Messenger RNA biogenesis [BR:
lta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H1A07_01435
Ribosome biogenesis [BR:
lta03009
]
Prokaryotic type
rRNA helicases
H1A07_01435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTQ40191
LinkDB
All DBs
Position
300344..301801
Genome browser
AA seq
485 aa
AA seq
DB search
MKFSEMNLKPEILKAIKRSGFEEATPIQEKTIPLVLEGKDVIGQAQTGTGKTAAFGLPIL
QKLDKQHDSIQAIIIEPTRELAIQTQEELFRLGRDEKARVQVVYGGADIRRQIRALKQTP
AILVGTPGRLLDHLKRGTIDISKVKTIVLDEADEMLDMGFIQDIESILNYASSRHQTLLF
SATMPKPILRIGEKFMNDPEIVKIKGKELTANLIDQYFVRAKENEKFDILCRLIDVQNPD
LAVIFGRTKRRVDELTRGLQARGYNAAGIHGDLSQAKRMSVLKRFRKGKLDILVATDVAA
RGLDISGVSHVYNYDIPQDPDSYVHRIGRTGRAGQNGMSVTFVTPNEIGYMRTIEQLTHK
KMMPLKPPTDEEAFKGQLSAANKKVAELLDSDLSKYTEGAAQLLDDYSAVDLVAALLKDL
SKDAESVKVKITPEKPLPFKSKHGNNNHHFKRNFKRGGDRNERYHRKPNARRGGRKHDFV
IKKKD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattttctgaaatgaacttaaagcctgagattttgaaagcaattaaacgctcaggt
tttgaagaagctacgccaatccaagaaaagaccattcctttagttttagagggaaaagat
gtaattggtcaagcacaaactggtactggtaaaactgcagcttttggtttaccaattttg
caaaagttggataagcaacatgattcaattcaagcaattattattgaacctactcgtgaa
ttggctattcaaacgcaagaagaactttttcgtctaggtcgtgatgaaaaggcacgtgtt
caagtagtttatggcggtgcagatattcgtcgtcaaattcgtgctttaaaacaaacacct
gcaattttagtgggaacgccgggacgtttacttgatcacttaaaacgaggaacaattgac
atctctaaggtaaagacaattgttttagatgaagcagatgaaatgcttgatatgggcttt
atccaagatattgagagtattttaaattatgcttctagcagacatcaaacgttgttattt
tcagcaactatgccaaaaccaattttacgaattggcgaaaagtttatgaatgatcctgaa
attgtaaaaattaaaggaaaagaattaacggctaacttaattgatcaatattttgtaaga
gcaaaagaaaacgaaaaatttgatattttatgtcgattaattgatgttcaaaatcctgat
cttgccgttatttttggcagaactaagagacgtgttgatgaattaacgcgtggattacag
gcgcgtggatacaatgcagctggaattcatggcgatctttctcaagctaagagaatgagc
gttttgaaaagatttcgtaagggtaaattggatatattagtggcaactgatgtagctgct
cgtggtttggatatttctggcgttagtcatgtttataactatgacattcctcaagatcca
gactcttatgttcaccggattggtagaactggacgtgctggtcaaaatggtatgtcagta
acttttgttacaccaaatgaaattggctacatgcgtacaattgaacaattaacgcacaaa
aagatgatgccacttaaaccaccaactgatgaagaggcctttaagggacaattaagtgca
gcgaataaaaaggtagcagaattattagatagtgatctttctaaatatactgaaggagca
gcccagcttcttgatgattactccgcggtagatttggttgcagctttattaaaggatcta
tctaaagatgctgaaagcgtaaaagtgaagattacacctgaaaaaccattaccatttaaa
tcaaaacatggtaataataatcatcactttaaacgtaattttaagcgtggcggagataga
aatgaaagatatcaccgtaagccaaatgctcgtcgtggtggtagaaaacatgacttcgtt
ataaagaagaaagactga
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