Lactobacillus taiwanensis: H1A07_01540
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Entry
H1A07_01540 CDS
T07177
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lta
Lactobacillus taiwanensis
Pathway
lta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H1A07_01540 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lta03021
]
H1A07_01540 (rpoC)
03400 DNA repair and recombination proteins [BR:
lta03400
]
H1A07_01540 (rpoC)
Enzymes [BR:
lta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H1A07_01540 (rpoC)
Transcription machinery [BR:
lta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H1A07_01540 (rpoC)
DNA repair and recombination proteins [BR:
lta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H1A07_01540 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QTQ40210
LinkDB
All DBs
Position
329866..333537
Genome browser
AA seq
1223 aa
AA seq
DB search
MIDVNKFESMQIGLASPNKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWSC
ACGKYKGIRYRGIVCDRCGVEVTSAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDI
SPRALEEVIYFAAYIVIDAGDTDLEDKQLLTEAEYREKKAKFGNRFEAKMGAEAVKELLE
QVDIDKEVHDLKEELKTATGQKRTRAIRRLDILDAFKNSGNKPSWMVMDCIPVIPPDLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPRIIVQNEKRMLQEAVDALIDNGR
RGRPVVGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVSPKLKFYQCGVPRP
MALELFKPFVMHELVKRGLASNIKNAKRKIDREDDDIWDILEDVIKERPVLLNRAPTLHR
LGIQAFEPVLVNGKSIRLHPLACEAYNADFDGDQMAIHVPLSDEAVAESRLLMLAAHHIL
APKDGKPIVTPSQDIVLGNYWLTQAERGREGEGMIFDSPAEAAIAYANGDIHYHTRIGLA
ADSMPEKPWPKGYEHGIFVTTYGKLVFNQIFPKDFFYINDPTQENLTHPLDERYFLQPGE
DIHEKLDNMKLGQAFKKGFLSDSIAQIYKDYKVQRTSDFLDDLKELGYTVCTTSGLTIGV
EDIPTITDKDDIVAEARKKVDVVSKQYRRGLITDEERHDRVISIWNNCKDIVQNEIAQIH
APRNPITIMADSGARGNISNFTQLAGMRGLMAAPNGGMMEIPVTSNFREGLSVLEMFMST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIIREEDCGTDRGLTVHAITEGDEMIEPLF
DRLVGRYTSKSVYDPETHEVICPADVLMDEDMAHKIVDAGVTEVTIRSVFTCNTQHGVCK
KCYGMNLATGDDVEVGEAVGTVAAQSIGEPGTQLTMRNFHNGGVAGAADITQGLPRVQEL
FEARNPKGRATISEVTGEITSIEEDPAEHTRQITVKGQTDTRTYDVPYTASVAVAEGDHV
VRGDKLTLGSIDPKELIRVRDALTTEKYILSEIQKAYRMQGVEIADKHVEVMARQMLQKV
RILDPGETDILPGELMDIGEFKARNREVIISGGIPATAQSVILGITKAALETNSFLSAAS
FQETTRVLTDASIRGKNDPLLGLKENVIIGKIIPAGTGMPVYREMEPKVDVPEDEKKKSV
YSIADIEKKLAAADAEKDNGSAD
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacgtaaataagtttgaaagtatgcaaattggtttggcttctccaaacaagatc
agaagttggtcttatggcgaagttaaaaagccagaaactatcaactatcgtactttgaaa
ccagaaaaagatggtttgttcgatgagagaattttcggaccaactaaagactggtcttgt
gcttgtggtaagtacaagggtattcgctatcgcggtattgtttgtgatcgatgtggtgta
gaagtaacttctgctaaagttagaagagaacgcatgggccacattgaattggctgcacca
gtttcacatatctggtatttcaaaggtattccatctcgtatgggattagttttagatatt
tcacctcgtgctcttgaagaagtaatttattttgctgcatatattgtaattgacgcaggt
gataccgatcttgaagataagcaacttcttacagaagctgaatatcgtgaaaagaaagca
aaatttggtaaccgttttgaagctaaaatgggtgccgaagctgtaaaagaacttcttgaa
caagtagatattgataaggaagttcatgacttaaaagaagaattaaagactgctactggt
caaaagagaactcgtgctatcagaagattagatatcttagatgcatttaagaactctggt
aataagccatcatggatggttatggattgtattccagttattccaccagacttaagacca
atggttcaacttgacggtggacgttttgctacttctgatttgaacgatttatatagacgt
gtaattaaccgtaacaaccgtttgaagagattgttagacttaaatgcaccaagaattatt
gttcaaaatgaaaagcgtatgcttcaagaagctgttgatgcattaatcgataacggtaga
cgtggccgtccagtggtcggaccaggtaaccgtccgcttaagtctctttctcacatgttg
aaaggtaagcagggacgtttccgccaaaacttacttggtaaacgtgttgactactcaggt
cgttcagttattgatgtttcacctaaattgaaattttatcaatgtggtgtaccacgtcca
atggctctagaattatttaagccatttgtaatgcatgaattagtaaaacgcggtttagca
tctaatattaagaatgctaagcgtaagattgatcgcgaagatgatgatatctgggacatc
ttagaagatgttattaaggaaagaccagttcttttgaaccgtgcccctactcttcaccgt
ctaggtattcaagcatttgaaccagttttggtaaatggtaagtcaattcgtcttcaccca
cttgcttgtgaagcttacaatgccgactttgatggagaccagatggctattcacgttcca
ttgtctgatgaagctgtagcagaatctcgcttacttatgttagctgctcaccatatcctt
gctcctaaagatggtaaaccaatcgttactccttcacaggatatcgttttaggtaactat
tggttaactcaagctgaacgtggtcgtgaaggtgaagggatgatttttgattcaccagca
gaagcagctattgcttatgcaaatggtgatattcactaccatactcgtatcggtttggca
gctgattcaatgcctgaaaagccatggccaaaaggttatgaacatggaatttttgtgact
acttatggtaagttagtcttcaatcaaatttttcctaaggactttttctacattaacgat
cctactcaagaaaatcttactcatccgcttgatgagagatacttcttgcaaccaggtgaa
gatattcatgagaagcttgataatatgaagcttggacaagcctttaagaagggcttcttg
tcagattctattgcacagatctataaggattacaaggttcaaagaacttcagacttcttg
gatgatttaaaggaattaggttacaccgtatgtacaacttctggtttaactattggtgtt
gaagatattccgacaatcactgataaggatgacatcgttgctgaagctcgtaagaaagtt
gatgttgtgtctaaacaatatcgtcgtggtttaatcactgatgaagaaagacatgatcga
gtaattagtatttggaataattgtaaagacattgttcaaaatgaaattgctcaaattcat
gcaccaagaaacccaattacaattatggccgattctggtgctcgtggtaacatttctaac
tttacccagcttgctggtatgcgtggtttgatggccgctcctaacggaggaatgatggaa
attcctgttacttcaaacttccgtgaaggtttgtctgttttggaaatgttcatgtccact
cacggtgctcgtaagggtatgacggataccgccttgaagactgccaactctgggtactta
actcgtcgtttggtagacgtagctcaggatgtcattattcgtgaagaagattgtggcact
gatcgtggtttaacggttcatgcaattactgaaggcgatgaaatgattgaaccattattt
gaccgtttggttggtcgttacacttctaagagtgtctatgatccagaaactcatgaagtt
atttgcccagcagatgtcttgatggacgaagatatggctcacaagatcgtagatgctggt
gttactgaggtaacaattcgttccgtatttacttgcaacactcaacatggtgtatgtaag
aagtgctatggtatgaaccttgctactggtgacgacgttgaagttggtgaagctgttggt
actgttgccgcacaatctatcggtgaacctggtactcagttaactatgcgtaacttccac
aacggtggtgttgctggtgctgcagatatcactcaaggtcttccacgtgttcaagaattg
ttcgaagcacgtaatcctaagggacgtgctacaatttctgaagtaactggtgaaataact
tcaattgaagaagatccagccgaacacactcgtcaaattaccgttaagggacaaactgat
actcgtacttatgacgtaccatatactgcttcagtagcagttgctgaaggagatcatgtt
gtacgtggagataagttaacccttggttctatcgatcctaaggaattgattcgtgtacgt
gatgcattgactaccgaaaaatacattctaagtgaaattcaaaaggcttatagaatgcag
ggtgtagaaattgccgacaaacacgttgaagttatggcacgtcaaatgcttcaaaaggtt
cgtattcttgacccaggtgaaactgatatcttaccaggtgaattaatggatattggtgaa
tttaaggcaagaaaccgtgaagtaattatttctggtggtattcctgcaactgcacaaagt
gtaattcttggtattaccaaggctgcccttgaaactaacagtttcttatctgcagcttca
ttccaggaaactactcgtgttcttactgatgcttctattcgcggcaagaacgatccatta
cttggtcttaaggaaaatgttattattggtaagattattcctgcaggtactggtatgcca
gtttaccgtgaaatggaacctaaagttgatgttcctgaagatgaaaagaaaaaatcagta
tattctatagctgatattgaaaagaaattagcagctgctgatgcagaaaaggataacggt
tcagctgattaa
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