Lactobacillus taiwanensis: H1A07_01700
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Entry
H1A07_01700 CDS
T07177
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lta
Lactobacillus taiwanensis
Pathway
lta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H1A07_01700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lta03021
]
H1A07_01700
03400 DNA repair and recombination proteins [BR:
lta03400
]
H1A07_01700
Enzymes [BR:
lta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H1A07_01700
Transcription machinery [BR:
lta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H1A07_01700
DNA repair and recombination proteins [BR:
lta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H1A07_01700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
SAM_EPH
DUF961
Corazonin
Motif
Other DBs
NCBI-ProteinID:
QTQ40241
LinkDB
All DBs
Position
349991..350929
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVDQEEAYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTALSYIQIDGVL
HEFSTIPGVREDVTKIILNLKKLELKSLSDEEKIAEIDVTGPAIVTAADLKVDSDIEVLN
PDQYICSIADGGHLHMNVAIKSGRGYVPASENKTDDMPIGVIPVDSLFSPIKKVNYQVES
ARVGKRDDYDKLTLEIWTDGSITPNDALSFAAKILVEHFKVFMSTDMDAQFDDVMVEKED
DKNEKKLEMTIEELDLSVRSYNCLKRAGINTVQELTDKSEADMMRVRNLGRKSLEEVKNK
LADLGLSLRQDD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgtagtagaccaagaggaggcatacggtaag
tttgttgtcgaaccactggaacgcggtttcgggactactttaggtaactcactccgtcga
gttttacttacttctattccaggtacggcactttcttacattcagattgatggagtattg
catgaattttcaacaattcctggcgtaagagaagacgtcacgaaaattattcttaatttg
aagaaactagagttaaagtcactctcagatgaagaaaaaattgctgaaatcgatgtaact
ggtccagcaatcgtaactgctgctgatttaaaggtcgactctgatattgaggtcttaaat
ccagatcaatatatttgtagtattgctgatggtggccatttgcatatgaacgttgcgatc
aaatctggtcgtggttatgttcccgcaagtgaaaacaagacagatgacatgcctattggt
gtcatccccgttgattcactcttttcaccaatcaaaaaagttaactaccaagttgaaagt
gctcgtgttggtaaaagagacgattatgacaaattaactttagaaatttggactgatggt
tcaatcacacctaatgatgcccttagtttcgctgcgaagattcttgtagaacacttcaag
gtatttatgtctactgatatggatgcgcagtttgatgatgtaatggtagaaaaagaggac
gataagaacgagaagaagcttgaaatgacgatcgaagagcttgatctatctgttcgttcc
tataactgcttgaaacgtgcaggaattaatactgttcaagaattaactgataaatctgaa
gcagatatgatgcgtgtacgtaacttaggacgtaagtcattagaagaagtaaagaataaa
cttgccgaccttggtctatcacttcgtcaagatgactaa
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