Lactobacillus taiwanensis: H1A07_02305
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Entry
H1A07_02305 CDS
T07177
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lta
Lactobacillus taiwanensis
Brite
KEGG Orthology (KO) [BR:
lta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lta03019
]
H1A07_02305
03009 Ribosome biogenesis [BR:
lta03009
]
H1A07_02305
Enzymes [BR:
lta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H1A07_02305
Messenger RNA biogenesis [BR:
lta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H1A07_02305
Ribosome biogenesis [BR:
lta03009
]
Prokaryotic type
rRNA helicases
H1A07_02305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
T4SS-DNA_transf
AAA_30
RBDV_coat
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QTQ40348
LinkDB
All DBs
Position
484937..486322
Genome browser
AA seq
461 aa
AA seq
DB search
MAQISSIFQNEKIRPELQAGLEKINFKKSTKVQSSVIPALLDNKNVVVQAATGSGKTHAY
LIPILNMIDENAPVTQAVVTAPSRELANQLYKVARQLRDASGLNISIEYLGGGNDRNRQI
EKAENKAPQLIIATPGRLHDFVSKKFINLENVKAFIIDEADMTLDMGFLGQMDEIMSRLD
KKAVLGAFSATIPVKLENFLRKYMAKPDFIVIDNPAIIAPTIQNDLIDVGSRDKKEILYK
LLTIGQPYLALVFANTKKTVDELTDYLEGQGLKVAKIHGGITERERKRIIRQVREGQYQY
VVASDLAARGIDIPGVSSVINYEIPKDLEFVIHRIGRTGRNGLEGHAITLIYDDEMSQIE
DLEKLGIHFDFKELKNGELVERTHYHRRDNRQARSHKLDNRMIGMVKKTKKKVKPGYKKK
IKQAIQKDRQQKRKIEERHQIRKAKRRRKREREQARGNFDN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaataagtagcatatttcaaaatgaaaaaattcgtccagaattacaagctgga
ctagaaaaaattaattttaaaaagtcaactaaagtgcaatcttcagttattccagcactt
ttagataataaaaatgttgttgtacaagctgcaactggttcaggaaaaacccatgcatat
ttgattccaattttgaatatgattgatgaaaatgcaccagtaacacaagctgttgtaact
gcacctagccgtgaattagctaatcaattatataaggttgcacgtcaattaagggatgct
agtggcttaaatatttctattgaatatttaggtggtggaaatgatcgtaatcgacaaatt
gagaaggctgaaaataaggcgccgcaattaatcattgcaactcctggacgtttacatgat
tttgtttctaaaaagttcattaatttagagaatgtcaaggcatttatcattgatgaagca
gatatgacattagacatgggctttttaggtcagatggatgaaattatgtctagactagac
aagaaggctgttttaggtgcattttcagctacaattccggttaaacttgaaaacttttta
agaaaatatatggcaaagccagactttattgtaattgataatccagcaattattgctcca
acaattcaaaatgacttaattgatgttggttctcgcgataaaaaggaaatcttgtacaaa
cttttgacgataggacagccatatttggctttagtttttgctaataccaaaaagacagtt
gatgaattgaccgactatcttgaagggcaaggacttaaggtagcgaaaatccatggtgga
attactgaacgcgaaagaaagagaattattcgtcaagtacgtgaaggtcaatatcaatac
gttgtagccagtgatttagctgctagaggaattgatatacctggtgtaagttcggtaatt
aactatgaaattcctaaggatcttgaatttgtaattcaccgaattggtagaacaggaaga
aatggactagaaggacatgcaattactttaatttatgatgatgaaatgtcacaaattgaa
gatctagaaaaattaggtattcactttgactttaaggaattaaagaatggcgaactagtt
gaaagaactcactatcatcgtagagacaatcgtcaagctcgtagccacaagttagataac
cgaatgattggaatggttaagaagaccaagaaaaaggttaagccgggctacaagaagaag
attaaacaggctattcaaaaagatcgtcagcaaaagaggaagatcgaagaacgccatcaa
attagaaaagctaagcgtagacgtaaacgtgaacgcgaacaagcacgtgggaattttgac
aactag
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