Lactobacillus taiwanensis: H1A07_05040
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Entry
H1A07_05040 CDS
T07177
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lta
Lactobacillus taiwanensis
Brite
KEGG Orthology (KO) [BR:
lta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lta03032
]
H1A07_05040 (topA)
03400 DNA repair and recombination proteins [BR:
lta03400
]
H1A07_05040 (topA)
Enzymes [BR:
lta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H1A07_05040 (topA)
DNA replication proteins [BR:
lta03032
]
Prokaryotic type
DNA Topoisomerases
H1A07_05040 (topA)
DNA repair and recombination proteins [BR:
lta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H1A07_05040 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
QTQ39234
LinkDB
All DBs
Position
complement(1055852..1057933)
Genome browser
AA seq
693 aa
AA seq
DB search
MPTKRKNKKNLVIVESPHKAKTIEKYLGRNYHVIASKGHIRDLPKSQMGVDVDHDYQPKY
ISIRGKGDTIKELKSEAKKAKYVYLASDPDREGEAIAWHVAHALNLDPKEHNRVAFNEIT
KDAVKNAFKNPRTIDMDIVDAQQARRVLDRLVGYSISPILWQKVKKGLSAGRVQSIALKL
VIDRENEIKNFKPEEYWTIDADFEKGKEKFKGAFYGIKGKKQELPNNEAVQDVLKRIDKR
KNFEVTKVVKKERKRQPAAPFTTSTMQQEANKRLGYRTRRTMRIAQSLYEGVNLGKGSVG
LITYMRTDSKRIANVAKHEASKFIHEEYGENYAAVKPQHFKNDADAQDAHEAIRPTSAFR
TPASVKEYLTTEEYRLYTLIWSRFIASQMTPAVYDTVRADIEQNDVTFRTTGSKLKFAGF
TKVYDNQKEKNNELPELNEGDKVKLKKTDDRQHFTQPPARYTEASLVRALEENGVGRPST
YAPTIDTIQKRYYVKLEGRSIVPTELGEIVDKLIEEFFPDIVNVDFTAQLENDLDGVEVG
KKNWIKVVDEYYKPFSKELDKADQQIEKVQIKDEPAGFNCDICGAPMVIKMGRYGKFYAC
SRFPDCRNTKPIVKKVGVTCPKCGKGEVIEKKSKRNRKFYGCSRYPDCDFVSWDQPIGRN
CPNDGHFLVQKKNKKGLVILCPNGDYREEPEEN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcctactaaacgaaaaaataaaaagaatttagttattgtcgagtctcctcataaggct
aagacaattgaaaaatatttaggtagaaattatcatgttatcgcttcaaaaggtcatatc
cgtgatttacccaagtcccaaatgggagttgatgtagaccatgattatcaaccaaaatat
atttccattcgtggaaaaggcgatacgattaaagaattaaaaagtgaagctaaaaaggct
aaatacgtttatcttgcttccgaccccgatcgtgaaggagaagctattgcttggcacgtt
gcgcatgccttgaacttagatcctaaagagcataaccgagttgcctttaatgaaattact
aaagacgctgttaaaaatgcctttaaaaatccacgaacaattgatatggatatcgttgat
gctcagcaagcacgtcgtgttcttgaccgcttggttggttattcaatcagccctattttg
tggcaaaaggttaagaaggggttgtctgctggacgtgttcagtcaattgccttgaagctt
gtaattgatcgtgaaaacgaaattaagaactttaagccagaagaatactggacaattgat
gctgattttgaaaaaggcaaagaaaaatttaagggtgctttttatggtatcaaaggtaaa
aagcaagaattgccaaataatgaagcagttcaggatgttttaaaacgcattgataagcgg
aagaactttgaagttacaaaggtagtcaaaaaggaaagaaaacgtcagcctgctgctcca
tttactacttcaactatgcagcaagaagcaaacaaacgcttaggctaccgtactcgtaga
acaatgagaattgctcaatctctttatgaaggagttaacttaggtaaaggttcagtaggg
ttaattacttatatgcgtactgactctaaacgaattgctaatgttgcaaaacatgaagct
tcaaaatttattcacgaagaatatggtgaaaattatgcagcagttaagccacagcatttt
aaaaacgatgcggatgctcaagatgctcacgaagcaattcgtccaacctcagcctttaga
actccagcttcagttaaagaatatttaactactgaagaatatcgtctgtatactttaatt
tggtcaagatttattgctagtcaaatgacgccagctgtttatgatacagtcagagctgat
attgagcaaaatgacgtaacttttagaacaactggttcaaaacttaagtttgctggtttt
accaaggtttacgacaatcaaaaagaaaagaacaatgagttacctgagttaaatgagggt
gataaggttaagcttaagaagactgatgatcgtcagcactttactcaaccaccagcacgt
tatactgaagctagtttagttcgtgctcttgaagaaaatggcgtaggtcgtccatcaact
tatgcaccaacaattgatactattcaaaagcgttattacgtgaaacttgaaggtcgatct
attgtaccgactgaattaggtgaaatcgttgataagttgatcgaagaatttttcccagat
atcgttaacgtagactttactgcacaacttgaaaacgatcttgatggtgttgaagtaggg
aagaagaattggatcaaagtagttgatgaatactacaaaccattttctaaagaattagat
aaggctgatcaacaaattgaaaaggttcaaatcaaagatgaaccagcaggctttaactgc
gacatttgtggagcaccaatggtaattaagatgggacgctatggtaagttttatgcttgt
tcacgctttccagattgtcgcaacactaaaccgattgttaaaaaggttggcgtaacttgc
cctaagtgtggcaaaggcgaagttattgaaaagaagtctaagcgtaatcgtaaattctac
ggttgttctcgttatccagattgtgactttgtttcatgggatcaaccaattgggcgtaat
tgtccaaacgatggtcatttcttagttcaaaagaagaacaagaaaggcctagtaattcta
tgtccaaatggcgattatcgtgaagagccagaagaaaattaa
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